Co-expression analysis

Gene ID Contig19171_at
Gene name
Homology with ArabidopsisSimilar to At4g24974: - (HF=2e+0)
Module size 11 genes
NF 0.34
%ile 46.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7489.10.94Contig19171_atContig19171--2e+0At4g24974-O.I.H.G.S.X.
0.5369.70.96HB15O22r_s_atHB15O22r--8e-1At2g21220auxin-responsive protein, putativeO.I.H.G.S.X.
0.4762.20.96Contig9739_atContig9739--1e+0At1g24470short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.4661.00.96Contig14588_atContig14588--2e+0At4g28850xyloglucan:xyloglucosyl transferase, putative / xyloglucan endotransglycosylase, putative / endo-xyloglucan transferase, putativeO.I.H.G.S.X.
0.4559.30.95Contig19172_atContig19172--2e+0At3g50470HR3 (HOMOLOG OF RPW8 3)O.I.H.G.S.X.
0.4053.10.96Contig11819_s_atContig11819--3e-3At1g08320bZIP family transcription factorO.I.H.G.S.X.
0.3545.10.96Contig6263_atContig6263--2e+0At5g61640PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1)O.I.H.G.S.X.
0.3443.60.96Contig10684_atContig10684--8e-17At1g31780-O.I.H.G.S.X.
0.2732.10.96Contig12107_atContig12107--2e-10At5g22000RHF2A (RING-H2 GROUP F2A)O.I.H.G.S.X.
0.2528.90.95Contig11492_atContig11492--4e+0At5g26210AL4 (ALFIN-LIKE 4)O.I.H.G.S.X.
0.1615.30.95Contig5894_s_atContig5894--3e-1At5g33300chromosome-associated kinesin-relatedO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.498.1GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.297.4GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.297.4GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.297.4GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.897.0GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
4.396.4GSM419981Seed_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
4.396.4GSM440975Control seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.196.2GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.494.8GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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