Co-expression analysis

Gene ID Contig19027_at
Gene name
Homology with ArabidopsisSimilar to At5g05290: ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2) (HF=1e+0)
Module size 6 genes
NF 0.58
%ile 80.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6380.30.96Contig19027_atContig19027--1e+0At5g05290ATEXPA2 (ARABIDOPSIS THALIANA EXPANSIN A2)O.I.H.G.S.X.
0.7388.70.96Contig11674_atContig11674--3e-1At5g49420MADS-box protein (AGL84)O.I.H.G.S.X.
0.5674.30.96Contig20382_atContig20382--4e-1At1g53910RAP2.12O.I.H.G.S.X.
0.5572.00.96Contig15852_atContig15852--1e-33At1g29940NRPA2O.I.H.G.S.X.
0.5066.90.96Contig18946_atContig18946--1e+0At5g65220ribosomal protein L29 family proteinO.I.H.G.S.X.
0.4255.20.97Contig16664_atContig16664--3e-8At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.098.7GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.298.5GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
6.898.3GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.097.9GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.697.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.397.4GSM431546pathogen isolates: Mock - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
5.297.4GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.297.4GSM372987genotype: 11542 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.897.0GSM431573pathogen isolates: Polymyxa betae - rep3GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
4.897.0GSM238439Embryo 72 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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