Co-expression analysis

Gene ID	Contig18816_at
Gene name
Homology with Arabidopsis	Similar to At1g71180: 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein (HF=3e+0)
Module size	11 genes
NF	0.38
%ile	51.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.95	Contig18816_at	Contig18816	-	-	3e+0	At1g71180	6-phosphogluconate dehydrogenase NAD-binding domain-containing protein	O.I.	H.G.	S.X.	Please select
0.59	75.8	0.95	Contig15179_at	Contig15179	-	-	2e+0	At5g46360	KCO3 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 3)	O.I.	H.G.	S.X.	Please select
0.37	47.9	0.95	Contig4878_at	Contig4878	-	-	8e-19	At1g47260	GAMMA CA2 (GAMMA CARBONIC ANHYDRASE 2)	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig16632_at	Contig16632	-	-	1e+0	At4g29960	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.95	Contig12673_at	Contig12673	-	-	1e-5	At4g15470	-	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.96	Contig15411_at	Contig15411	-	-	2e-4	At5g49890	CLC-C (CHLORIDE CHANNEL C)	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.96	rbaal22m07_at	rbaal22m07	-	-	2e-1	At1g06440	ubiquitin thiolesterase	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.96	Contig15347_at	Contig15347	-	-	3e-2	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.96	Contig24772_at	Contig24772	-	-	1e-4	At5g63740	zinc finger protein-related	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.96	Contig13168_at	Contig13168	-	-	3e+0	At5g50130	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.96	Contig2475_at	Contig2475	-	-	7e-2	At4g11870	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.7	97.7	GSM431547	pathogen isolates: Mock - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
5.5	97.6	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.3	97.4	GSM431550	pathogen isolates: Polymyxa graminis - rep2	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis
3.8	95.7	GSM431568	pathogen isolates: Mock inoculated control - rep1	GSE17240	Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betae
3.2	94.3	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.1	94.1	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
3.0	93.8	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
2.8	93.1	GSM372956	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.8	93.1	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
2.6	92.3	GSM431546	pathogen isolates: Mock - rep1	GSE17238	Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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