Co-expression analysis

Gene ID Contig18641_at
Gene name
Homology with ArabidopsisSimilar to At1g68850: peroxidase, putative (HF=5e-4)
Module size 6 genes
NF 0.42
%ile 59.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9198.10.88Contig18641_atContig18641--5e-4At1g68850peroxidase, putativeO.I.H.G.S.X.
0.5066.90.87Contig17857_atContig17857--4e-5At3g02600LPP3 (LIPID PHOSPHATE PHOSPHATASE 3)O.I.H.G.S.X.
0.5066.90.87Contig22190_s_atContig22190--4e-2At4g27745-O.I.H.G.S.X.
0.5066.90.87S0001100116E08F1_x_atS0001100116E08F1--1e+1At3g29639-O.I.H.G.S.X.
0.2326.10.88HB25K17r_atHB25K17r--2e+0At4g09260unknown proteinO.I.H.G.S.X.
0.1514.10.88Contig25564_atContig25564--7e-1At3g30220unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
58.5100.0GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
14.899.5GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
7.498.5GSM311263kara_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
6.598.2GSM431569pathogen isolates: Mock inoculated control - rep2GSE17240Response of barley roots during the non-host interaction with the plasmodiophorid virus vector Polymyxa betaeLink to GEO
5.797.7GSM431549pathogen isolates: Polymyxa graminis - rep1GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.897.0GSM398263HS41-1_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.396.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.695.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM146380Maythorpe shoot Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.494.8GSM398249Martin_0d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.206163.1.S1_at, orthologous to the query gene, Contig18641_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5984.9PtpAffx.206163.1.S1_atAt1g68850hypothetical protein-5e-13At2g41480electron carrier/ heme binding / peroxidaseO.I.H.G.S.X.
0.2950.5PtpAffx.219632.1.S1_atAt1g68850hypothetical protein-2e+0At4g24070carbon-carbon lyaseO.I.H.G.S.X.
0.2441.8PtpAffx.140465.1.A1_atAt1g68850--1e+1At4g07825unknown proteinO.I.H.G.S.X.
0.2136.5PtpAffx.200917.1.S1_atAt1g68850hypothetical protein-9e-35At2g30130ASL5O.I.H.G.S.X.
0.1830.8PtpAffx.77335.1.S1_atAt1g68850hypothetical protein-4e-1At2g29450ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5)O.I.H.G.S.X.
0.1423.5PtpAffx.18039.1.A1_atAt1g68850--1e-3At2g47060serine/threonine protein kinase, putativeO.I.H.G.S.X.
0.1423.5PtpAffx.36788.2.S1_atAt1g68850hypothetical protein-1e-6At4g36450ATMPK14 (Mitogen-activated protein kinase 14)O.I.H.G.S.X.
0.1118.1PtpAffx.77318.2.S1_atAt1g68850hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)O.I.H.G.S.X.
0.0914.6PtpAffx.211137.1.S1_atAt1g68850hypothetical protein-5e-8At3g03540NPC5 (NON-SPECIFIC PHOSPHOLIPASE C5)O.I.H.G.S.X.
0.0812.9Ptp.3664.1.S1_atAt1g68850hypothetical protein-2e-37At2g17530protein kinase family proteinO.I.H.G.S.X.
0.069.8PtpAffx.131798.1.S1_atAt1g68850hypothetical protein-5e+0At5g23920unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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