Co-expression analysis

Gene ID Contig18572_at
Gene name
Homology with ArabidopsisSimilar to At4g33660: unknown protein (HF=6e-5)
Module size 10 genes
NF 0.19
%ile 23.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7891.20.89Contig18572_atContig18572--6e-5At4g33660unknown proteinO.I.H.G.S.X.
0.3240.30.91HV11O23u_x_atHV11O23u--2e+0At3g28230-O.I.H.G.S.X.
0.3037.00.92Contig19461_atContig19461--3e-1At1g04260MPI7 (CAMV MOVEMENT PROTEIN INTERACTING PROTEIN 7)O.I.H.G.S.X.
0.2021.10.92Contig19591_atContig19591--2e+0At3g24710-O.I.H.G.S.X.
0.1818.20.91Contig6732_atContig6732--6e-14At3g44720ADT4 (arogenate dehydratase 4)O.I.H.G.S.X.
0.1412.90.93Contig12171_atContig12171--6e+0At2g31670-O.I.H.G.S.X.
0.1311.60.92Contig25850_atContig25850--4e-4At5g67490unknown proteinO.I.H.G.S.X.
0.1210.40.92rbaal36n07_atrbaal36n07--5e-3At4g16835pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.119.40.93Contig21329_atContig21329--1e-1At5g47229unknown proteinO.I.H.G.S.X.
0.108.40.93Contig4864_atContig4864--2e-40At4g17530ATRAB1CO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
19.299.7GSM261043before 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
12.199.3GSM261044before 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
8.498.8GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.598.6GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.298.0GSM372954genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.597.6GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
5.497.5GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.396.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.096.0GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.494.8GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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