Co-expression analysis

Gene ID Contig1846_s_at
Gene name
Homology with ArabidopsisSimilar to At4g35090: CAT2 (CATALASE 2) (HF=9e-29)
Module size 6 genes
NF 0.52
%ile 72.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.83Contig1846_s_atContig1846--9e-29At4g35090CAT2 (CATALASE 2)O.I.H.G.S.X.
0.6178.70.75EBem10_SQ003_N11_atEBem10_SQ003_N11--3e+0At3g06770glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family proteinO.I.H.G.S.X.
0.5674.30.83Contig11888_atContig11888--8e-1At3g10260reticulon family proteinO.I.H.G.S.X.
0.5066.90.88Contig670_atContig670--7e-1At4g35725unknown proteinO.I.H.G.S.X.
0.4762.20.83Contig16181_atContig16181--3e-10At3g15520peptidyl-prolyl cis-trans isomerase TLP38, chloroplast / thylakoid lumen PPIase of 38 kDa / cyclophilin / rotamaseO.I.H.G.S.X.
0.2935.50.87Contig12771_atContig12771--9e-15At5g10940transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
7.298.5GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.597.6GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
5.297.4GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.097.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.997.1GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.696.8GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.596.7GSM440973Stressed awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.496.6GSM372966genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.396.4GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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