Co-expression analysis

Gene ID	Contig18288_at
Gene name
Homology with Arabidopsis	Similar to At1g73325: trypsin and protease inhibitor family protein / Kunitz family protein (HF=1e+0)
Module size	8 genes
NF	0.55
%ile	76.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.96	Contig18288_at	Contig18288	-	-	1e+0	At1g73325	trypsin and protease inhibitor family protein / Kunitz family protein	O.I.	H.G.	S.X.	Please select
0.74	89.1	0.96	Contig10891_s_at	Contig10891	-	-	7e-1	At3g50695	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.96	Contig10041_at	Contig10041	-	-	8e-29	At2g20280	zinc finger (CCCH-type) family protein	O.I.	H.G.	S.X.	Please select
0.58	74.9	0.95	Contig13879_at	Contig13879	-	-	6e-4	At4g38620	MYB4	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.96	Contig10050_s_at	Contig10050	-	-	5e-2	At2g25052	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig10690_at	Contig10690	-	-	2e-5	At2g35530	bZIP transcription factor family protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.95	Contig13528_at	Contig13528	-	-	9e-9	At1g29690	CAD1 (constitutively activated cell death 1)	O.I.	H.G.	S.X.	Please select
0.30	37.0	0.96	Contig4135_at	Contig4135	-	-	2e-7	At4g08390	SAPX (STROMAL ASCORBATE PEROXIDASE)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.0	96.0	GSM372992	genotype: 11542 - pathogen isolates: K1 - time: 0 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.6	92.3	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment
2.6	92.3	GSM261057	Xantha b-12 Cotrol rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.5	91.9	GSM372976	genotype: 11542 - pathogen isolates: 5874 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.5	91.9	GSM372940	genotype: Mla6 - pathogen isolates: 5874 - time: 0 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
2.5	91.9	GSM419977	Palea_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
2.5	91.9	GSM440965	Control palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress
2.4	91.4	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
2.4	91.4	GSM261051	Bonus Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.4	91.4	GSM372997	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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