Co-expression analysis

Gene ID Contig18275_at
Gene name
Homology with ArabidopsisSimilar to At3g48450: nitrate-responsive NOI protein, putative (HF=5e-1)
Module size 6 genes
NF 0.24
%ile 30.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4661.00.72Contig18275_atContig18275--5e-1At3g48450nitrate-responsive NOI protein, putativeO.I.H.G.S.X.
0.3240.30.73Contig14114_atContig14114--2e+0At1g48460unknown proteinO.I.H.G.S.X.
0.3138.60.87Contig15427_atContig15427--7e+0At4g29110unknown proteinO.I.H.G.S.X.
0.1818.20.79Contig15329_atContig15329--5e-10At5g16530PIN5 (PIN-FORMED 5)O.I.H.G.S.X.
0.1412.90.77Contig23287_atContig23287--7e+0At4g17680protein binding / zinc ion bindingO.I.H.G.S.X.
0.1311.60.83HA07k01r_atHA07k01r--1e+0At3g48640unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
54.4100.0GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
20.399.7GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.897.0GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.796.9GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM238415Endosperm 8DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.995.8GSM261069Albina f-17 Control rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
3.695.3GSM372998genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.494.8GSM261068Albina f-17 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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