Co-expression analysis

Gene ID Contig18246_at
Gene name
Homology with ArabidopsisSimilar to At4g27410: RD26 (RESPONSIVE TO DESICCATION 26) (HF=2e+0)
Module size 13 genes
NF 0.41
%ile 56.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4863.20.95Contig18246_atContig18246--2e+0At4g27410RD26 (RESPONSIVE TO DESICCATION 26)O.I.H.G.S.X.
0.5674.30.95Contig4748_s_atContig4748ribophorin I-2e-2At1g76400ribophorin I family proteinO.I.H.G.S.X.
0.5066.90.95Contig4750_atContig4750--4e+0At5g15360unknown proteinO.I.H.G.S.X.
0.4153.90.95Contig9332_atContig9332--6e+0At3g01470ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1)O.I.H.G.S.X.
0.4053.10.95Contig8374_atContig8374--5e-1At5g62900unknown proteinO.I.H.G.S.X.
0.3647.10.95Contig10520_s_atContig10520--3e-1At4g39990RABA4B (RAB GTPASE HOMOLOG A4B)O.I.H.G.S.X.
0.3342.60.95Contig10818_atContig10818--1e-2At1g47970unknown proteinO.I.H.G.S.X.
0.3342.60.96Contig4413_s_atContig4413--7e+0At2g40790ATCXXS2 (C-TERMINAL CYSTEINE RESIDUE IS CHANGED TO A SERINE 1)O.I.H.G.S.X.
0.3138.60.96Contig10032_atContig10032--7e-3At5g09850transcription elongation factor-relatedO.I.H.G.S.X.
0.3037.00.95Contig6884_s_atContig6884--9e-5At4g34100protein binding / zinc ion bindingO.I.H.G.S.X.
0.2326.10.95Contig19982_atContig19982--1e-4At2g18400ribosomal protein L6 family proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.696.8GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.396.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.695.3GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.394.6GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
3.294.3GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.194.1GSM372983genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.993.4GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
2.893.1GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
2.893.1GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
2.792.7GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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