Co-expression analysis

Gene ID Contig18223_at
Gene name
Homology with ArabidopsisSimilar to At2g27710: 60S acidic ribosomal protein P2 (RPP2B) (HF=1e+0)
Module size 8 genes
NF 0.55
%ile 76.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7589.50.96Contig18223_atContig18223--1e+0At2g2771060S acidic ribosomal protein P2 (RPP2B)O.I.H.G.S.X.
0.6178.70.97Contig7067_atContig7067--2e-14At3g04240SEC (secret agent)O.I.H.G.S.X.
0.5774.90.96Contig7648_atContig7648--6e-1At1g12250thylakoid lumenal protein-relatedO.I.H.G.S.X.
0.5066.90.97Contig13002_atContig13002--2e-10At1g45150unknown proteinO.I.H.G.S.X.
0.4762.20.96Contig15809_x_atContig15809--7e-2At1g04778unknown proteinO.I.H.G.S.X.
0.4661.00.96Contig4160_atContig4160--7e-17At4g04950thioredoxin family proteinO.I.H.G.S.X.
0.4661.00.97Contig10064_atContig10064--2e+0At2g12465LCR50 (Low-molecular-weight cysteine-rich 50)O.I.H.G.S.X.
0.3138.60.97Contig14345_atContig14345--2e-8At2g20840secretory carrier membrane protein (SCAMP) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.497.5GSM372948genotype: Mla6 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.897.0GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.196.2GSM372984genotype: 11542 - pathogen isolates: 5874 - time: 20 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.595.1GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.494.8GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.194.1GSM372951genotype: Mla6 - pathogen isolates: 5874 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.093.8GSM440961Stressed lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.893.1GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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