Co-expression analysis

Gene ID	Contig17584_at
Gene name
Homology with Arabidopsis	Similar to At1g26150: PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10) (HF=8e-21)
Module size	11 genes
NF	0.42
%ile	58.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.91	Contig17584_at	Contig17584	-	-	8e-21	At1g26150	PERK10 (PROLINE-RICH EXTENSIN-LIKE RECEPTOR KINASE 10)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.94	Contig13137_at	Contig13137	-	-	4e+0	At4g25820	XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9)	O.I.	H.G.	S.X.	Please select
0.59	75.8	0.94	HVSMEb0007P14r2_at	HVSMEb0007P14r2	-	-	2e+0	At5g62130	Per1-like protein-related	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.94	Contig15181_at	Contig15181	-	-	5e+0	At5g57170	macrophage migration inhibitory factor family protein / MIF family protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig20160_at	Contig20160	-	-	8e-2	At3g59740	receptor lectin kinase 3 (lecRK3)	O.I.	H.G.	S.X.	Please select
0.41	53.9	0.95	Contig10225_s_at	Contig10225	-	-	4e+0	At5g09490	40S ribosomal protein S15 (RPS15B)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.94	Contig15349_at	Contig15349	-	-	2e-1	At5g38730	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.94	Contig10899_at	Contig10899	-	-	3e+0	At3g63530	BB (BIG BROTHER)	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.94	Contig22848_at	Contig22848	-	-	3e-1	At3g59640	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.94	Contig1493_at	Contig1493	-	-	8e-12	At4g25740	40S ribosomal protein S10 (RPS10A)	O.I.	H.G.	S.X.	Please select
0.25	28.9	0.94	EBpi01_SQ004_K18_at	EBpi01_SQ004_K18	-	-	3e+0	At5g35525	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.2	97.4	GSM372965	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.9	95.8	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
3.9	95.8	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
3.9	95.8	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
3.6	95.3	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
3.4	94.8	GSM372970	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM372968	genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM238423	Endosperm 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.0	93.8	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
3.0	93.8	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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