Co-expression analysis

Gene ID Contig17320_at
Gene name
Homology with ArabidopsisSimilar to At3g61040: CYP76C7 (HF=1e-1)
Module size 6 genes
NF 0.45
%ile 62.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.94Contig17320_atContig17320--1e-1At3g61040CYP76C7O.I.H.G.S.X.
0.5572.00.95Contig17334_atContig17334--3e-5At1g72230plastocyanin-like domain-containing proteinO.I.H.G.S.X.
0.5066.90.95Contig20730_s_atContig20730--5e-3At1g73885unknown proteinO.I.H.G.S.X.
0.4661.00.96Contig44_atContig44--3e-23At5g02500HSC70-1 (HEAT SHOCK COGNATE PROTEIN 70-1)O.I.H.G.S.X.
0.3849.50.95Contig9449_atContig9449--3e-18At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.2427.20.95Contig12345_atContig12345--2e-29At4g17300NS1O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
8.598.8GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
8.398.8GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
6.398.1GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.697.7GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.597.6GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.597.6GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.997.1GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.897.0GSM238419Endosperm 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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