Co-expression analysis

Gene ID Contig17164_at
Gene name
Homology with ArabidopsisSimilar to At5g28050: cytidine/deoxycytidylate deaminase family protein (HF=7e-1)
Module size 6 genes
NF 0.26
%ile 33.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.92Contig17164_atContig17164--7e-1At5g28050cytidine/deoxycytidylate deaminase family proteinO.I.H.G.S.X.
0.5066.90.91Contig2263_s_atContig2263--2e-9At3g56940CRD1 (COPPER RESPONSE DEFECT 1)O.I.H.G.S.X.
0.5066.90.92Contig188_atContig188--9e-8At1g08880H2AXAO.I.H.G.S.X.
0.4053.10.91HVSMEf0021O19r2_s_atHVSMEf0021O19r2--5e-6At3g02020AK3 (ASPARTATE KINASE 3)O.I.H.G.S.X.
0.3545.10.91Contig20962_atContig20962--9e-9At2g33820MBAC1O.I.H.G.S.X.
0.108.40.91Contig23961_atContig23961--3e-1At4g14450unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.698.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
7.498.5GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
7.298.5GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
7.098.4GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
6.298.0GSM146368Maythorpe Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.198.0GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
6.097.9GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.497.5GSM146367Maythorpe Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
5.297.4GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
5.297.4GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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