Co-expression analysis

Gene ID Contig17135_s_at
Gene name
Homology with ArabidopsisSimilar to At5g53590: auxin-responsive family protein (HF=7e-1)
Module size 15 genes
NF 0.30
%ile 39.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5874.90.90Contig17135_s_atContig17135--7e-1At5g53590auxin-responsive family proteinO.I.H.G.S.X.
0.3950.50.92Contig15074_atContig15074--4e+0At2g27160unknown proteinO.I.H.G.S.X.
0.3950.50.93HI04H23u_atHI04H23u--4e+0At5g15290integral membrane family proteinO.I.H.G.S.X.
0.3849.50.93Contig15125_atContig15125--2e-9At5g43700ATAUX2-11 (AUXIN INDUCIBLE 2-11)O.I.H.G.S.X.
0.3647.10.92Contig6811_s_atContig6811--5e-1At1g26470-O.I.H.G.S.X.
0.3342.60.94Contig10899_atContig10899--3e+0At3g63530BB (BIG BROTHER)O.I.H.G.S.X.
0.3240.30.93HVSMEb0007P14r2_atHVSMEb0007P14r2--2e+0At5g62130Per1-like protein-relatedO.I.H.G.S.X.
0.3037.00.95Contig20160_atContig20160--8e-2At3g59740receptor lectin kinase 3 (lecRK3)O.I.H.G.S.X.
0.2835.50.93rbags1d23_s_atrbags1d23--1e+1At5g50000protein kinase, putativeO.I.H.G.S.X.
0.2835.50.93Contig14638_atContig14638--4e-35At4g3080040S ribosomal protein S11 (RPS11B)O.I.H.G.S.X.
0.2630.40.93Contig7205_atContig7205--2e-2At2g32550rcd1-like cell differentiation family proteinO.I.H.G.S.X.
0.2528.90.94Contig16313_atContig16313--1e-1At1g35170-O.I.H.G.S.X.
0.1919.60.93Contig6956_atContig6956--2e-1At2g33410heterogeneous nuclear ribonucleoprotein, putative / hnRNP, putativeO.I.H.G.S.X.
0.1716.90.94Contig20397_atContig20397--2e-3At1g53420serine/threonine protein kinase-relatedO.I.H.G.S.X.
0.1615.30.92Contig5542_atContig5542--6e-4At3g54640TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.796.9GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.595.1GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
3.394.6GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
3.194.1GSM215730Control (DMSO) treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.194.1GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.093.8GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.093.8GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
3.093.8GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
2.993.4GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
2.993.4GSM215727Control (DMSO) treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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