Co-expression analysis

Gene ID Contig17106_at
Gene name
Homology with ArabidopsisSimilar to At1g26890: - (HF=5e+0)
Module size 6 genes
NF 0.32
%ile 43.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.96Contig17106_atContig17106--5e+0At1g26890-O.I.H.G.S.X.
0.4458.90.96HS17M12u_s_atHS17M12u--4e+0At3g23250MYB15 (MYB DOMAIN PROTEIN 15)O.I.H.G.S.X.
0.3647.10.96Contig5369_atContig5369--1e-1At3g46150unknown proteinO.I.H.G.S.X.
0.3240.30.96Contig9706_atContig9706--2e-4At2g33610ATSWI3B (SWITCH SUBUNIT 3)O.I.H.G.S.X.
0.2630.40.96Contig11977_atContig11977--6e-1At5g62490ATHVA22BO.I.H.G.S.X.
0.1514.10.96Contig12784_atContig12784--2e-10At1g28520VOZ1 (VASCULAR PLANT ONE ZINC FINGER PROTEIN)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
17.999.7GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
14.299.5GSM282040Malting_kilned_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
11.699.3GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.598.8GSM282030Malting_day4_Harrington_rep2GSE11200Expression data from malting barley seedsLink to GEO
5.997.9GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
4.796.9GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.696.8GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM372955genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.795.5GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.695.3GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, PsAffx.psHB017xG12f_s_at, orthologous to the query gene, Contig17106_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9198.6PsAffx.psHB017xG12f_s_atAt1g26890--1e+0At3g60720PDLP8 (PLASMODESMATA-LOCATED PROTEIN 8)O.I.H.G.S.X.
0.4766.6PsAffx.psML004xO23f_atAt1g26890--1e-1At5g4770060S acidic ribosomal protein P1 (RPP1C)O.I.H.G.S.X.
0.3346.1PsAffx.C203000005_s_atAt1g26890--2e-1At3g09032unknown proteinO.I.H.G.S.X.
0.2939.0PsAffx.CL154Contig1_atAt1g26890--1e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.2939.0PsAffx.C18000095_atAt1g26890--2e+1At5g54970unknown proteinO.I.H.G.S.X.
0.058.0PsAffx.CL498Contig1_atAt1g26890--1e+1At5g21005unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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