Co-expression analysis

Gene ID Contig16875_at
Gene name vacuolar Na+/H+ antiporter
Homology with ArabidopsisSimilar to At5g27150: NHX1 (NA+/H+ EXCHANGER) (HF=3e-15)
Module size 7 genes
NF 0.67
%ile 88.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8694.80.90Contig16875_atContig16875vacuolar Na+/H+ antiporter-3e-15At5g27150NHX1 (NA+/H+ EXCHANGER)O.I.H.G.S.X.
0.7388.70.93HX03C24u_atHX03C24u--1e-2At5g47500pectinesterase family proteinO.I.H.G.S.X.
0.7187.10.92Contig9625_atContig9625--1e-14At2g45440DHDPS2 (DIHYDRODIPICOLINATE SYNTHASE)O.I.H.G.S.X.
0.6380.30.92HY08C12u_atHY08C12u--3e+0At5g23640unknown proteinO.I.H.G.S.X.
0.5674.30.92Contig18868_atContig18868--6e-1At4g01023zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5066.90.93Contig21697_atContig21697--1e+0At4g35980unknown proteinO.I.H.G.S.X.
0.4661.00.94Contig20310_atContig20310--3e+0At5g56370F-box family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.998.7GSM71147OWB-D unstress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
7.898.6GSM71145OWB-D unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
7.698.6GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
7.498.5GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
6.498.1GSM71146OWB-D unstress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
5.597.6GSM71139OWB-D stress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
4.897.0GSM71140OWB-D stress replicate 2GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
4.396.4GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.396.4GSM71141OWB-D stress replicate 3GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
3.895.7GSM238418Endosperm 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, Gma.2120.1.S1_at, orthologous to the query gene, Contig16875_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.2Gma.2120.1.S1_atAt5g27150sodium/proton antiporter-1e-23At3g05030NHX2 (SODIUM HYDROGEN EXCHANGER 2)O.I.H.G.S.X.
0.2939.0Gma.3728.1.S1_atAt5g27150--2e-3At2g30560glycine-rich proteinO.I.H.G.S.X.
0.2839.0Gma.16869.1.S1_atAt5g27150--2e-8At2g21410VHA-A2 (VACUOLAR PROTON ATPASE A2)O.I.H.G.S.X.
0.2735.7GmaAffx.93063.1.S1_atAt5g27150--3e-4At3g03160unknown proteinO.I.H.G.S.X.
0.2735.7GmaAffx.90087.1.S1_atAt5g27150--8e+0At5g04347-O.I.H.G.S.X.
0.2633.9GmaAffx.30380.1.A1_atAt5g27150--1e+0At2g17850-O.I.H.G.S.X.
0.2633.9Gma.2808.1.S1_atAt5g27150--1e-35At3g48040ROP10 (RHO-RELATED PROTEIN FROM PLANTS 10)O.I.H.G.S.X.
0.2532.6GmaAffx.90087.1.S1_x_atAt5g27150--8e+0At5g04347-O.I.H.G.S.X.
0.2532.6GmaAffx.73658.1.S1_s_atAt5g27150Peroxisomal betaine-aldehyde dehydrogenase-2e+0At3g47920unknown proteinO.I.H.G.S.X.
0.2532.6GmaAffx.30250.1.S1_atAt5g27150--9e+0At5g64342CPuORF39 (Conserved peptide upstream open reading frame 39)O.I.H.G.S.X.
0.2532.6Gma.13515.1.A1_atAt5g27150--2e-5At4g04910NSF (N-ethylmaleimide sensitive factor)O.I.H.G.S.X.
0.2430.9Gma.2468.1.S1_atAt5g27150--2e-103At1g78720protein transport protein sec61, putativeO.I.H.G.S.X.
0.2430.9Gma.17912.1.S1_atAt5g27150--4e-7At3g27030unknown proteinO.I.H.G.S.X.
0.2329.9Gma.1537.1.S1_atAt5g27150--5e-48At2g33120SAR1 (SYNAPTOBREVIN-RELATED PROTEIN 1)O.I.H.G.S.X.
0.2126.6GmaAffx.83798.1.S1_s_atAt5g27150--7e+0At4g26980unknown proteinO.I.H.G.S.X.
0.2025.1GmaAffx.24874.1.S1_atAt5g27150--3e+0At3g28950avirulence-responsive protein-related / avirulence induced gene (AIG) protein-relatedO.I.H.G.S.X.
0.2025.1GmaAffx.91674.1.S1_atAt5g27150--2e-8At5g53560CB5-E (CYTOCHROME B5 ISOFORM E)O.I.H.G.S.X.
0.1923.7Gma.2944.1.S1_atAt5g27150--4e-15At4g13520SMAP1 (SMALL ACIDIC PROTEIN 1)O.I.H.G.S.X.
0.1822.3GmaAffx.7243.1.S1_atAt5g27150--2e+0At3g63040unknown proteinO.I.H.G.S.X.
0.1721.2Gma.5969.1.S1_a_atAt5g27150--2e-17At1g67785unknown proteinO.I.H.G.S.X.
0.1619.7Gma.5576.2.S1_atAt5g27150MnSOD-2e+0At1g18720unknown proteinO.I.H.G.S.X.
0.1518.7GmaAffx.24570.1.A1_atAt5g27150--3e+0At4g01450nodulin MtN21 family proteinO.I.H.G.S.X.
0.1518.7GmaAffx.11956.1.A1_atAt5g27150--7e-1At4g21090adrenodoxin-like ferredoxin 1O.I.H.G.S.X.
0.1417.5Gma.5860.1.A1_atAt5g27150--1e-15At1g08040unknown proteinO.I.H.G.S.X.
0.1316.3Gma.6165.1.S1_atAt5g27150--5e+0At4g18800ATRABA1D (ARABIDOPSIS RAB GTPASE HOMOLOG A1D)O.I.H.G.S.X.
0.1316.3GmaAffx.15172.1.S1_atAt5g27150--1e+0At2g40935unknown proteinO.I.H.G.S.X.
0.1114.2GmaAffx.14173.1.S1_atAt5g27150--2e-14At4g16695unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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