Co-expression analysis

Gene ID Contig16664_at
Gene name
Homology with ArabidopsisSimilar to At1g73180: eukaryotic translation initiation factor-related (HF=3e-8)
Module size 7 genes
NF 0.63
%ile 85.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3849.50.97Contig16664_atContig16664--3e-8At1g73180eukaryotic translation initiation factor-relatedO.I.H.G.S.X.
0.7790.80.96Contig1760_s_atContig1760--2e-9At1g09340CRB (CHLOROPLAST RNA BINDING)O.I.H.G.S.X.
0.7388.70.97Contig11673_atContig11673--7e-8At2g35720DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.7187.10.97Contig15463_atContig15463--5e+0At5g11930glutaredoxin family proteinO.I.H.G.S.X.
0.6178.70.97Contig11731_atContig11731--2e-10At3g02450cell division protein ftsH, putativeO.I.H.G.S.X.
0.6077.30.97Contig26395_atContig26395--5e+0At5g07460PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2)O.I.H.G.S.X.
0.4255.20.97Contig841_x_atContig841--1e-35At2g34420LHB1B2O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.898.6GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.398.5GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
5.697.7GSM238434Embryo 24 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.397.4GSM238428Embryo 16DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.197.3GSM398276Moroc9-75_1d_rep1GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
4.596.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.096.0GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.895.7GSM238436Embryo 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.795.5GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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