Co-expression analysis

Gene ID	Contig16567_at
Gene name
Homology with Arabidopsis	Similar to At5g42260: BGLU12 (BETA GLUCOSIDASE 12) (HF=7e-3)
Module size	6 genes
NF	0.31
%ile	41.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	0.79	Contig16567_at	Contig16567	-	-	7e-3	At5g42260	BGLU12 (BETA GLUCOSIDASE 12)	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.80	Contig11969_at	Contig11969	-	-	2e-6	At5g04330	cytochrome P450, putative / ferulate-5-hydroxylase, putative	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.84	Contig12377_at	Contig12377	-	-	2e-1	At5g59210	myosin heavy chain-related	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.75	Contig4761_at	Contig4761	-	-	2e-8	At1g05520	transport protein, putative	O.I.	H.G.	S.X.	Please select
0.18	18.2	0.82	Contig7673_at	Contig7673	-	-	2e-7	At1g56080	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	12.9	0.77	Contig17860_at	Contig17860	-	-	4e-5	At1g02110	proline-rich family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
3.9	95.8	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.9	95.8	GSM238432	Embryo 0 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.8	95.7	GSM238433	Embryo 0 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.5	95.1	GSM238434	Embryo 24 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
3.3	94.6	GSM261079	Albina e-16 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.2	94.3	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.0	93.8	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds
2.9	93.4	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
2.9	93.4	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
2.8	93.1	GSM261067	Xantha s-46 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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