Co-expression analysis

Gene ID Contig16179_s_at
Gene name
Homology with ArabidopsisSimilar to At4g31700: RPS6 (RIBOSOMAL PROTEIN S6) (HF=5e+0)
Module size 6 genes
NF 0.20
%ile 25.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.90Contig16179_s_atContig16179--5e+0At4g31700RPS6 (RIBOSOMAL PROTEIN S6)O.I.H.G.S.X.
0.5066.90.94Contig9855_s_atContig9855--6e-5At5g47220ERF2 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 2)O.I.H.G.S.X.
0.3342.60.95Contig8747_atContig8747--9e-16At1g79470inosine-5'-monophosphate dehydrogenaseO.I.H.G.S.X.
0.2528.90.93Contig7818_atContig7818--2e-2At5g02502unknown proteinO.I.H.G.S.X.
0.1210.40.94Contig7681_s_atContig7681--4e-18At5g64030dehydration-responsive protein-relatedO.I.H.G.S.X. decarbonylase enzyme CER1;1-like-5e+0At5g07100WRKY26O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.797.7GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.797.7GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.396.4GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
4.196.2GSM261021ABA-Control-rep1GSE10328ABA experimentLink to GEO
4.096.0GSM261022ABA-Control-rep2GSE10328ABA experimentLink to GEO
4.096.0GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
3.895.7GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
3.795.5GSM261025ABA-Early-rep2GSE10328ABA experimentLink to GEO
3.695.3GSM160815drought control rep3GSE6990Barley drought stressLink to GEO
3.494.8GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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