Co-expression analysis

Gene ID	Contig15978_at
Gene name
Homology with Arabidopsis	Similar to At2g18250: ATCOAD (4-phosphopantetheine adenylyltransferase) (HF=4e-1)
Module size	6 genes
NF	0.52
%ile	72.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.96	Contig15978_at	Contig15978	-	-	4e-1	At2g18250	ATCOAD (4-phosphopantetheine adenylyltransferase)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.96	Contig10032_at	Contig10032	-	-	7e-3	At5g09850	transcription elongation factor-related	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.96	Contig19726_at	Contig19726	-	-	3e-4	At2g18410	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.96	Contig12918_at	Contig12918	-	-	3e+1	At5g02280	synbindin, putative	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig6023_s_at	Contig6023	-	-	3e-12	At4g12230	esterase/lipase/thioesterase family protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.96	Contig6884_s_at	Contig6884	-	-	9e-5	At4g34100	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.7	99.3	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
11.4	99.3	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
9.2	99.0	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
8.6	98.8	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
8.4	98.8	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
8.2	98.7	GSM146367	Maythorpe Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.2	98.7	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.8	98.6	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
7.7	98.6	GSM146361	Golden Promise Root Salt, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
7.6	98.6	GSM146368	Maythorpe Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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