Co-expression analysis

Gene ID Contig1576_at
Gene name
Homology with ArabidopsisSimilar to At4g20680: receptor-like protein kinase-related (HF=2e+0)
Module size 6 genes
NF 0.51
%ile 70.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5774.90.95Contig1576_atContig1576--2e+0At4g20680receptor-like protein kinase-relatedO.I.H.G.S.X.
0.6178.70.96Contig7966_atContig7966--4e+0At2g42830SHP2 (SHATTERPROOF 2)O.I.H.G.S.X.
0.5774.90.95Contig24391_atContig24391--3e+0At5g41430zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.4053.10.96Contig21004_atContig21004--2e+1At5g19030RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3849.50.95Contig8908_atContig8908--3e-12At2g21270ubiquitin fusion degradation UFD1 family proteinO.I.H.G.S.X.
0.3342.60.96Contig8129_atContig8129--5e-1At1g23145RALFL2 (RALF-LIKE 2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.096.0GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.895.7GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.795.5GSM261059Xantha b-12 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM261076Albina e-16 Control rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.194.1GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
3.093.8GSM161200cold treatment rep1GSE6993Barley low temperature stressLink to GEO
3.093.8GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
2.893.1GSM161221cold treatment rep3GSE6993Barley low temperature stressLink to GEO
2.792.7GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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