Co-expression analysis

Gene ID	Contig15721_at
Gene name
Homology with Arabidopsis	Similar to At5g59360: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.74
%ile	93.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.88	Contig15721_at	Contig15721	-	-	1e+0	At5g59360	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.86	Contig24429_at	Contig24429	-	-	2e+0	At5g39220	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.86	Contig21626_at	Contig21626	-	-	4e+0	At5g59440	ZEU1 (ZEUS1)	O.I.	H.G.	S.X.	Please select
0.80	92.5	0.85	HT11N18r_s_at	HT11N18r	-	-	1e+0	At1g16025	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.88	Contig14721_at	Contig14721	-	-	5e+0	At4g15670	glutaredoxin family protein	O.I.	H.G.	S.X.	Please select
0.42	55.2	0.88	Contig9101_s_at	Contig9101	-	-	7e+0	At5g23930	mitochondrial transcription termination factor-related / mTERF-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.8	99.1	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
8.7	98.9	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
6.2	98.0	GSM146364	Maythorpe Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
6.0	97.9	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
5.2	97.4	GSM146359	Golden Promise Root Control, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.8	97.0	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
4.5	96.7	GSM382233	Root_Hg2	GSE15295	Mercury toxicity in barley roots
4.5	96.7	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
4.4	96.6	GSM146362	Golden Promise Root Salt, biological rep 3	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.3	96.4	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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