Co-expression analysis

Gene ID Contig15721_at
Gene name
Homology with ArabidopsisSimilar to At5g59360: unknown protein (HF=1e+0)
Module size 6 genes
NF 0.74
%ile 93.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8092.50.88Contig15721_atContig15721--1e+0At5g59360unknown proteinO.I.H.G.S.X.
0.9198.10.86Contig24429_atContig24429--2e+0At5g39220hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.8394.00.86Contig21626_atContig21626--4e+0At5g59440ZEU1 (ZEUS1)O.I.H.G.S.X.
0.8092.50.85HT11N18r_s_atHT11N18r--1e+0At1g16025unknown proteinO.I.H.G.S.X.
0.4458.90.88Contig14721_atContig14721--5e+0At4g15670glutaredoxin family proteinO.I.H.G.S.X.
0.4255.20.88Contig9101_s_atContig9101--7e+0At5g23930mitochondrial transcription termination factor-related / mTERF-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.899.1GSM146358Golden Promise Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
8.798.9GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
6.298.0GSM146364Maythorpe Root Control, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
6.097.9GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
5.297.4GSM146359Golden Promise Root Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.897.0GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
4.596.7GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
4.496.6GSM146362Golden Promise Root Salt, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
4.396.4GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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