Co-expression analysis

Gene ID Contig15627_s_at
Gene name
Homology with ArabidopsisSimilar to At5g15802: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.24
%ile 30.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.94Contig15627_s_atContig15627--4e+0At5g15802unknown proteinO.I.H.G.S.X.
0.6077.30.95HU03K03u_atHU03K03u--5e+0At5g58640selenoprotein-relatedO.I.H.G.S.X.
0.4053.10.95Contig16402_atContig16402--2e+0At2g06530VPS2.1O.I.H.G.S.X.
0.2021.10.95Contig23379_atContig23379--9e-2At2g02020proton-dependent oligopeptide transport (POT) family proteinO.I.H.G.S.X.
0.1716.90.95Contig21025_atContig21025--7e-2At2g16340unknown proteinO.I.H.G.S.X.
0.086.50.95HVSMEk0017M22r2_atHVSMEk0017M22r2--1e+0At2g34440AGL29 (AGAMOUS-LIKE 29)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.999.2GSM238435Embryo 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.899.1GSM71153Barke stress and unstress replicate 4GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
9.799.0GSM238412Endosperm 4DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
9.599.0GSM238409Pericarp 4DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
8.498.8GSM238411Pericarp 8DAF; seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.998.7GSM238408Pericarp 4DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.898.6GSM71151Barke stress and unstress replicate 1GSE3170 Barley single feature polymorphisms and drought stress gene expressionLink to GEO
7.698.6GSM238413Endosperm 4DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
6.598.2GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.697.7GSM146361Golden Promise Root Salt, biological rep 2GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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