Co-expression analysis

Gene ID	Contig15615_x_at
Gene name
Homology with Arabidopsis	Similar to At1g35260: MLP165 (MLP-LIKE PROTEIN 165) (HF=2e+0)
Module size	6 genes
NF	0.43
%ile	59.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	72.0	0.93	Contig15615_x_at	Contig15615	-	-	2e+0	At1g35260	MLP165 (MLP-LIKE PROTEIN 165)	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.94	Contig11322_at	Contig11322	-	-	9e-3	At5g64670	ribosomal protein L15 family protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.94	Contig17546_at	Contig17546	-	-	3e-1	At2g32890	RALFL17 (RALF-LIKE 17)	O.I.	H.G.	S.X.	Please select
0.57	74.9	0.94	Contig16934_at	Contig16934	-	-	5e-6	At4g31450	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig7391_at	Contig7391	-	-	2e-25	At5g42000	ORMDL family protein	O.I.	H.G.	S.X.	Please select
0.10	8.4	0.94	Contig11036_at	Contig11036	-	-	3e-6	At1g10740	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.9	98.9	GSM238431	Embryo 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.9	98.3	GSM238430	Embryo 25DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.9	97.9	GSM282032	Malting_day1_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.5	96.7	GSM238438	Embryo 72 h; Seed germination; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.4	96.6	GSM146357	Golden Promise Root Control, biological rep1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
4.3	96.4	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.9	95.8	GSM215731	gibberellin treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.8	95.7	GSM146358	Golden Promise Root Control, biological rep 2	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
3.6	95.3	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.5	95.1	GSM238433	Embryo 0 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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