Co-expression analysis

Gene ID	Contig1557_at
Gene name
Homology with Arabidopsis	Similar to At3g60245: 60S ribosomal protein L37a (RPL37aC) (HF=3e-23)
Module size	7 genes
NF	0.10
%ile	12.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.91	Contig1557_at	Contig1557	-	-	3e-23	At3g60245	60S ribosomal protein L37a (RPL37aC)	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.92	Contig6213_x_at	Contig6213	-	-	8e-4	At1g05850	POM1 (POM-POM1)	O.I.	H.G.	S.X.	Please select
0.14	12.9	0.92	Contig8411_at	Contig8411	-	-	2e-1	At3g58630	transcription factor	O.I.	H.G.	S.X.	Please select
0.11	9.4	0.92	Contig1604_at	Contig1604	-	-	1e-10	At1g06680	PSBP-1 (PHOTOSYSTEM II SUBUNIT P-1)	O.I.	H.G.	S.X.	Please select
0.08	6.5	0.92	HVSMEf0014I15r2_x_at	HVSMEf0014I15r2	-	-	2e+0	At5g48000	CYP708A2	O.I.	H.G.	S.X.	Please select
0.06	4.8	0.92	HVSMEk0002P01f_x_at	HVSMEk0002P01f	-	-	4e+0	At5g60960	pentatricopeptide (PPR) repeat-containing protein	O.I.	H.G.	S.X.	Please select
0.05	4.1	0.92	Contig15375_at	Contig15375	-	-	2e+0	At5g49410	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.6	96.8	GSM419976	Palea_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
4.6	96.8	GSM440964	Control palea_Rep2	GSE17669	Gene expression in the barley spike during drought stress
3.7	95.5	GSM372998	genotype: 11542 - pathogen isolates: K1 - time: 16 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM373004	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.4	94.8	GSM261027	ABA-Late-rep1	GSE10328	ABA experiment
3.3	94.6	GSM419974	Lemma_Rep3	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.3	94.6	GSM440959	Control lemma_Rep3	GSE17669	Gene expression in the barley spike during drought stress
3.0	93.8	GSM373006	genotype: 11542 - pathogen isolates: K1 - time: 24 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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