Co-expression analysis

Gene ID Contig15395_at
Gene name
Homology with ArabidopsisSimilar to At3g55646: unknown protein (HF=4e-3)
Module size 6 genes
NF 0.20
%ile 25.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8394.00.86Contig15395_atContig15395--4e-3At3g55646unknown proteinO.I.H.G.S.X.
0.3545.10.93HU14B24u_s_atHU14B24u--5e+0At5g62330-O.I.H.G.S.X.
0.3342.60.92Contig11975_atContig11975--1e-23At3g14940ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3)O.I.H.G.S.X.
0.2427.20.92Contig21415_atContig21415--5e+0At3g61980serine protease inhibitor, Kazal-type family proteinO.I.H.G.S.X.
0.1818.20.91Contig1078_x_atContig1078--0At4g02890UBQ14O.I.H.G.S.X.
0.054.10.92Contig16243_atContig16243--9e-9At3g26890unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.198.7GSM440966Stressed palea_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
7.998.7GSM281748Genotype: Morex - rep1GSE11182Steptoe x Morex seedling leaf comparisonLink to GEO
6.097.9GSM440960Stressed lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.096.0GSM440967Stressed palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.895.7GSM440968Stressed palea_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.394.6GSM440962Stressed lemma_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.294.3GSM3634635 mM B(OH)3 treatment (5B) - rep1GSE14521Late response to boron toxicity in barley leavesLink to GEO
3.194.1GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.093.8GSM398251Martin_0d_rep3GSE15970Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley GenotypesLink to GEO
2.893.1GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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