Co-expression analysis

Gene ID	Contig15357_at
Gene name
Homology with Arabidopsis	Similar to At1g24440: protein binding / zinc ion binding (HF=3e-1)
Module size	8 genes
NF	0.35
%ile	46.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.95	Contig15357_at	Contig15357	-	-	3e-1	At1g24440	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.96	Contig5369_at	Contig5369	-	-	1e-1	At3g46150	unknown protein	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.95	Contig7963_at	Contig7963	-	-	9e-12	At5g63310	NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2)	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig17106_at	Contig17106	-	-	5e+0	At1g26890	-	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.95	Contig18260_at	Contig18260	-	-	2e-15	At1g22150	SULTR1	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.95	HS17M12u_s_at	HS17M12u	-	-	4e+0	At3g23250	MYB15 (MYB DOMAIN PROTEIN 15)	O.I.	H.G.	S.X.	Please select
0.26	30.4	0.95	Contig5368_at	Contig5368	-	-	2e+0	At3g46150	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.95	Contig15347_at	Contig15347	-	-	3e-2	At1g45230	defective chloroplasts and leaves protein-related / DCL protein-related	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
19.1	99.7	GSM282030	Malting_day4_Harrington_rep2	GSE11200	Expression data from malting barley seeds
14.2	99.5	GSM282038	Malting_kilned_Morex_rep1	GSE11200	Expression data from malting barley seeds
12.5	99.4	GSM282033	Malting_day4_Harrington_rep4	GSE11200	Expression data from malting barley seeds
12.0	99.3	GSM282040	Malting_kilned_Morex_rep2	GSE11200	Expression data from malting barley seeds
8.2	98.7	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.9	97.1	GSM282034	Malting_steeped_Morex_rep1	GSE11200	Expression data from malting barley seeds
4.6	96.8	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.0	96.0	GSM282031	Malting_day1_Harrington_rep1	GSE11200	Expression data from malting barley seeds
3.7	95.5	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.6	95.3	GSM282041	Control_dryseed_Morex_rep2	GSE11200	Expression data from malting barley seeds

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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