Co-expression analysis

Gene ID Contig15165_s_at
Gene name
Homology with ArabidopsisSimilar to At3g28460: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.47
%ile 64.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5066.90.96Contig15165_s_atContig15165--2e+0At3g28460unknown proteinO.I.H.G.S.X.
0.6178.70.96Contig10954_atContig10954--4e+0At3g21175ZML1 (ZIM-LIKE 1)O.I.H.G.S.X.
0.4458.90.97Contig416_x_atContig416--5e-29At4g24190SHD (SHEPHERD)O.I.H.G.S.X.
0.4053.10.96Contig7333_atContig7333--6e-2At3g54360protein binding / zinc ion bindingO.I.H.G.S.X.
0.3647.10.96Contig609_atContig609--7e+0At2g04420nucleic acid bindingO.I.H.G.S.X.
0.3545.10.97Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.7GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
7.398.5GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
6.898.3GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
4.296.3GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
4.196.2GSM440974Stressed awn_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
4.096.0GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
3.695.3GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
3.494.8GSM238410Pericarp 8DAF; seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
3.194.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage