Co-expression analysis

Gene ID	Contig15036_at
Gene name
Homology with Arabidopsis	Similar to At3g07090: unknown protein (HF=1e-1)
Module size	6 genes
NF	0.98
%ile	99.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.97	Contig15036_at	Contig15036	-	-	1e-1	At3g07090	unknown protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.97	Contig9378_at	Contig9378	-	-	6e-10	At3g16100	ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C)	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.97	Contig7103_s_at	Contig7103	-	-	3e-16	At3g21430	-	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.97	Contig14821_at	Contig14821	-	-	4e-2	At2g27130	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.97	Contig5185_at	Contig5185	-	-	2e+0	At2g41480	electron carrier/ heme binding / peroxidase	O.I.	H.G.	S.X.	Please select
0.83	94.0	0.97	HU14M07u_s_at	HU14M07u	-	-	1e+0	At5g65050	AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.3	98.8	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress
7.2	98.5	GSM419982	Seed_Rep2	GSE16754	Comparative transcriptional profiling of organs of the barley spike
7.2	98.5	GSM440976	Control seed_Rep2	GSE17669	Gene expression in the barley spike during drought stress
7.2	98.5	GSM440980	Stressed seed_Rep3	GSE17669	Gene expression in the barley spike during drought stress
6.9	98.3	GSM238417	Endosperm 16DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
6.7	98.3	GSM440979	Stressed seed_Rep2	GSE17669	Gene expression in the barley spike during drought stress
6.7	98.3	GSM261070	Albina f-17 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.3	98.1	GSM238419	Endosperm 25DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
5.7	97.7	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.7	97.7	GSM261064	Xantha s-46 Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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