Co-expression analysis

Gene ID	Contig14948_at
Gene name
Homology with Arabidopsis	Similar to At5g35730: EXS family protein / ERD1/XPR1/SYG1 family protein (HF=1e-4)
Module size	8 genes
NF	0.36
%ile	49.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.59	75.8	0.88	Contig14948_at	Contig14948	-	-	1e-4	At5g35730	EXS family protein / ERD1/XPR1/SYG1 family protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.92	Contig13951_at	Contig13951	-	-	7e+0	At5g18404	unknown protein	O.I.	H.G.	S.X.	Please select
0.43	56.4	0.92	Contig5523_at	Contig5523	-	-	4e-8	At5g10480	PAS2 (PASTICCINO 2)	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.93	Contig25339_at	Contig25339	-	-	7e-2	At5g57655	xylose isomerase family protein	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.92	Contig7433_at	Contig7433	-	-	5e-11	At5g63650	SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.92	Contig7968_at	Contig7968	-	-	3e-1	At3g53980	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	O.I.	H.G.	S.X.	Please select
0.24	27.2	0.89	Contig24256_at	Contig24256	-	-	4e+0	At5g44420	PDF1.2	O.I.	H.G.	S.X.	Please select
0.17	16.9	0.91	Contig20588_at	Contig20588	-	-	1e+0	At5g38130	transferase family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.3	96.4	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.6	95.3	GSM261054	Bonus Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM372957	genotype: Mla6 - pathogen isolates: K1 - time: 0 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.5	95.1	GSM419975	Palea_Rep1	GSE16754	Comparative transcriptional profiling of organs of the barley spike
3.5	95.1	GSM440963	Control palea_Rep1	GSE17669	Gene expression in the barley spike during drought stress
3.1	94.1	GSM311260	kara_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
3.0	93.8	GSM310864	lina_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
2.9	93.4	GSM261052	Bonus Control rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
2.6	92.3	GSM160744	drought control rep2	GSE6990	Barley drought stress
2.6	92.3	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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