Co-expression analysis

Gene ID Contig14891_at
Gene name
Homology with ArabidopsisSimilar to At3g61870: unknown protein (HF=5e-9)
Module size 26 genes
NF 0.62
%ile 84.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8293.10.95Contig14891_atContig14891--5e-9At3g61870unknown proteinO.I.H.G.S.X.
0.7991.40.97Contig10241_atContig10241--2e-9At1g29120unknown proteinO.I.H.G.S.X.
0.7187.10.97Contig19387_atContig19387--2e-1At3g30580unknown proteinO.I.H.G.S.X.
0.7086.00.97HA12A08u_s_atHA12A08u--5e-2At1g22780PFL (POINTED FIRST LEAVES)O.I.H.G.S.X.
0.7086.00.98Contig16972_atContig16972--5e-10At5g64813LIP1 (Light Insensitive Period1)O.I.H.G.S.X.
0.6784.70.98Contig19492_atContig19492--5e-1At5g41340UBC4 (UBIQUITIN CONJUGATING ENZYME 4)O.I.H.G.S.X.
0.6784.70.98Contig25214_atContig25214--1e+0At3g26935zinc finger (DHHC type) family proteinO.I.H.G.S.X.
0.6681.50.97Contig10380_x_atContig10380--4e-1At1g17880nascent polypeptide-associated complex (NAC) domain-containing protein / BTF3b-like transcription factor, putativeO.I.H.G.S.X.
0.6681.50.97EBem09_SQ001_B21_s_atEBem09_SQ001_B21--2e+0At5g36920unknown proteinO.I.H.G.S.X.
0.6480.90.98Contig23530_s_atContig23530--8e+0At3g57072unknown proteinO.I.H.G.S.X.
0.6380.30.97Contig15982_atContig15982--3e-4At3g19290ABF4 (ABRE BINDING FACTOR 4)O.I.H.G.S.X.
0.6380.30.98HM01F24T_s_atHM01F24T--4e-5At2g3337060S ribosomal protein L23 (RPL23B)O.I.H.G.S.X.
0.6380.30.98Contig7221_s_atContig7221--6e+0At5g47610zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.6178.70.98HS18F06u_s_atHS18F06u--7e-14At2g4761060S ribosomal protein L7A (RPL7aA)O.I.H.G.S.X.
0.5975.80.98Contig14763_atContig14763--2e-1At2g37510RNA-binding protein, putativeO.I.H.G.S.X.
0.5975.80.97Contig20949_atContig20949--2e+0At4g34150C2 domain-containing proteinO.I.H.G.S.X.
0.5874.90.95HT06A08u_s_atHT06A08u--8e-4At1g2691060S ribosomal protein L10 (RPL10B)O.I.H.G.S.X.
0.5774.90.98Contig18703_atContig18703--1e+0At5g48205zinc ion bindingO.I.H.G.S.X.
0.5674.30.96Contig3972_atContig3972--7e-7At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.5572.00.96Contig3541_s_atContig3541--2e-5At2g36390SBE2.1 (starch branching enzyme 2.1)O.I.H.G.S.X.
0.5369.70.97HY09M22u_s_atHY09M22u--3e+0At2g04378beta-galactosidaseO.I.H.G.S.X.
0.5369.70.97Contig23732_atContig23732--6e-1At1g05190emb2394 (embryo defective 2394)O.I.H.G.S.X.
0.5167.50.97rbasd18a22_s_atrbasd18a22--3e-3At5g1520040S ribosomal protein S9 (RPS9B)O.I.H.G.S.X.
0.5167.50.97Contig2345_s_atContig2345--3e-1At5g0480040S ribosomal protein S17 (RPS17D)O.I.H.G.S.X.
0.4963.70.97Contig26100_atContig26100--2e+0At1g53460unknown proteinO.I.H.G.S.X.
0.4762.20.97Contig1913_s_atContig1913--2e-46At3g0920060S acidic ribosomal protein P0 (RPP0B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.199.2GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.997.9GSM261042before 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.197.3GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
3.995.8GSM282031Malting_day1_Harrington_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.595.1GSM311255hsp5_with_aphids_3GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO
3.494.8GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.394.6GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
3.194.1GSM282036Malting_steeped_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
2.792.7GSM372963genotype: Mla6 - pathogen isolates: K1 - time: 16 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
2.692.3GSM311253hsp5_with_aphids_1GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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