Co-expression analysis

Gene ID Contig14797_at
Gene name
Homology with ArabidopsisSimilar to At5g05610: AL1 (ALFIN-LIKE 1) (HF=9e+0)
Module size 7 genes
NF 0.13
%ile 16.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4661.00.88Contig14797_atContig14797--9e+0At5g05610AL1 (ALFIN-LIKE 1)O.I.H.G.S.X.
0.4458.90.92Contig25003_atContig25003--2e-1At2g45520unknown proteinO.I.H.G.S.X.
0.3240.30.91HK01E08r_s_atHK01E08r--4e+0At2g27340-O.I.H.G.S.X.
0.2122.60.90Contig16552_atContig16552--5e+0At5g49440unknown proteinO.I.H.G.S.X.
0.1311.60.90Contig14168_s_atContig14168--4e-18At1g74880NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O)O.I.H.G.S.X.
0.075.80.90Contig19276_atContig19276--2e+0At5g17120-O.I.H.G.S.X.
0.064.80.90Contig4226_atContig4226--1e-11At1g11360universal stress protein (USP) family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.999.1GSM215731gibberellin treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.596.7GSM215728gibberellin treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.496.6GSM215732gibberellin plus Yariv-reagent treatment rep2GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
4.396.4GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
4.396.4GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.096.0GSM282037Malting_day1_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
3.995.8GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.995.8GSM146377Maythorpe shoot Control, biological rep 3GSE6325Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden PromiseLink to GEO
3.895.7GSM238424Endosperm 48 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.795.5GSM282039Malting_day4_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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