Co-expression analysis

Gene ID	Contig1470_s_at
Gene name
Homology with Arabidopsis	Similar to At4g00610: DNA-binding storekeeper protein-related (HF=6e-3)
Module size	6 genes
NF	0.49
%ile	68.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	88.7	0.94	Contig1470_s_at	Contig1470	-	-	6e-3	At4g00610	DNA-binding storekeeper protein-related	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.95	Contig1356_s_at	Contig1356	-	-	4e+0	At4g02450	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.95	Contig11557_at	Contig11557	-	-	2e+0	At5g27860	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.94	Contig14981_at	Contig14981	-	-	5e-1	At1g25330	basic helix-loop-helix (bHLH) family protein	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.94	Contig10922_at	Contig10922	-	-	3e-16	At3g48380	-	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.94	Contig14078_at	Contig14078	-	-	2e-21	At4g01800	preprotein translocase secA subunit, putative	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.5	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
4.7	96.9	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
4.1	96.2	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.8	95.7	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
3.7	95.5	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
3.4	94.8	GSM372967	genotype: Mla6 - pathogen isolates: K1 - time: 20 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.3	94.6	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
3.1	94.1	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.0	93.8	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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