Co-expression analysis

Gene ID Contig14590_at
Gene name
Homology with ArabidopsisSimilar to At3g11810: unknown protein (HF=2e-2)
Module size 7 genes
NF 0.50
%ile 70.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.89Contig14590_atContig14590--2e-2At3g11810unknown proteinO.I.H.G.S.X.
0.6784.70.89Contig24765_atContig24765--1e+0At1g03170unknown proteinO.I.H.G.S.X.
0.6380.30.90HVSMEg0005G16r2_atHVSMEg0005G16r2--5e+0At5g57410unknown proteinO.I.H.G.S.X.
0.4458.90.89rbags19e09_s_atrbags19e09--3e+0At1g37150HCS2 (holocarboxylase synthetase 2)O.I.H.G.S.X.
0.4053.10.90Contig1453_x_atContig1453--6e-38At3g25520ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5)O.I.H.G.S.X.
0.3950.50.90Contig18655_atContig18655--1e+0At3g63250HMT2 (HOMOCYSTEINE METHYLTRANSFERASE 2)O.I.H.G.S.X.
0.3240.30.89Contig12809_atContig12809--4e-1At4g18975pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.699.4GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
12.199.3GSM238429Embryo 16DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
10.299.1GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
9.699.0GSM261047after 3 days in mannitol medium rep3GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
8.898.9GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
7.998.7GSM261046after 3 days in mannitol medium rep2GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
5.997.9GSM215729gibberellin plus Yariv-reagent treatment rep1GSE8712The effects of Yariv-reagent on barley aleurone GA signalingLink to GEO
5.897.8GSM282035Malting_day4_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
5.697.7GSM440972Stressed awn_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.497.5GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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