Co-expression analysis

Gene ID Contig14572_at
Gene name
Homology with ArabidopsisSimilar to At4g21410: protein kinase family protein (HF=3e-5)
Module size 6 genes
NF 0.52
%ile 71.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6178.70.93Contig14572_atContig14572--3e-5At4g21410protein kinase family proteinO.I.H.G.S.X.
0.5066.90.95HVSMEb0007P14r2_atHVSMEb0007P14r2--2e+0At5g62130Per1-like protein-relatedO.I.H.G.S.X.
0.5066.90.96Contig20160_atContig20160--8e-2At3g59740receptor lectin kinase 3 (lecRK3)O.I.H.G.S.X.
0.4053.10.95Contig10899_atContig10899--3e+0At3g63530BB (BIG BROTHER)O.I.H.G.S.X.
0.3138.60.95Contig14377_atContig14377--6e+0At4g02040unknown proteinO.I.H.G.S.X.

Click More genes

Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
6.798.3GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
6.598.2GSM382234Root_Hg3GSE15295Mercury toxicity in barley rootsLink to GEO
6.598.2GSM382233Root_Hg2GSE15295Mercury toxicity in barley rootsLink to GEO
5.897.8GSM382237Root_Control3GSE15295Mercury toxicity in barley rootsLink to GEO
5.497.5GSM382235Root_Control1GSE15295Mercury toxicity in barley rootsLink to GEO
5.097.2GSM382236Root_Control2GSE15295Mercury toxicity in barley rootsLink to GEO
4.496.6GSM431547pathogen isolates: Mock - rep2GSE17238Response of barley roots during the host interaction with the plasmodiophorid virus vector Polymyxa graminisLink to GEO
4.396.4GSM238423Endosperm 24 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM130802salinity stress, biological rep2GSE5605Expression data from barley under salinity stress and JA treatmentLink to GEO
3.995.8GSM31125128-4_without_aphids_2GSE12584Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

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