Co-expression analysis

Gene ID Contig14526_at
Gene name
Homology with ArabidopsisSimilar to At2g21790: RNR1 (RIBONUCLEOTIDE REDUCTASE 1) (HF=2e-16)
Module size 6 genes
NF 0.54
%ile 74.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.2935.50.83Contig14526_atContig14526--2e-16At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.
0.8092.50.90Contig6235_s_atContig6235--1e+0At3g27850RPL12-C (ribosomal protein l12-c)O.I.H.G.S.X.
0.7388.70.88Contig15767_atContig15767--1e-1At1g21520unknown proteinO.I.H.G.S.X.
0.6784.70.89Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)O.I.H.G.S.X.
0.6178.70.87Contig6233_s_atContig6233--3e-8At5g08790ATAF2O.I.H.G.S.X.
0.3138.60.88Contig3365_atContig3365--2e-85At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.9GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
7.098.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.498.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.198.0GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.497.5GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.297.4GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.596.7GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.196.2GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

A co-expression module including the maize gene, Zm.5173.1.A1_at, orthologous to the query gene, Contig14526_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7590.8Zm.5173.1.A1_atAt2g21790--5e-36At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.
0.7590.8ZmAffx.216.1.S1_atAt2g21790--1e+1At5g44970-O.I.H.G.S.X.
0.7389.9Zm.4182.1.S1_atAt2g21790hypothetical protein LOC100276027-1e-4At5g54855pollen Ole e 1 allergen and extensin family proteinO.I.H.G.S.X.
0.5571.6Zm.4001.1.A1_atAt2g21790superal1-7e-16At1g17730VPS46.1 (VACUOLAR PROTEIN SORTING 46.1)O.I.H.G.S.X.
0.4455.7Zm.13409.1.S1_atAt2g217903-oxoacyl-synthase III-6e-2At1g62640KAS III (3-KETOACYL-ACYL CARRIER PROTEIN SYNTHASE III)O.I.H.G.S.X.
0.4251.3Zm.7709.1.A1_atAt2g21790hypothetical protein LOC100280092-5e-1At1g71695peroxidase 12 (PER12) (P12) (PRXR6)O.I.H.G.S.X.
0.3233.4Zm.5947.1.A1_atAt2g21790--3e+0At2g16490XH domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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