Co-expression analysis

Gene ID Contig14526_at
Gene name
Homology with ArabidopsisSimilar to At2g21790: RNR1 (RIBONUCLEOTIDE REDUCTASE 1) (HF=2e-16)
Module size 6 genes
NF 0.54
%ile 74.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.2935.50.83Contig14526_atContig14526--2e-16At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.
0.8092.50.90Contig6235_s_atContig6235--1e+0At3g27850RPL12-C (ribosomal protein l12-c)O.I.H.G.S.X.
0.7388.70.88Contig15767_atContig15767--1e-1At1g21520unknown proteinO.I.H.G.S.X.
0.6784.70.89Contig6238_s_atContig6238--1e-7At2g30860ATGSTF9 (GLUTATHIONE S-TRANSFERASE PHI 9)O.I.H.G.S.X.
0.6178.70.87Contig6233_s_atContig6233--3e-8At5g08790ATAF2O.I.H.G.S.X.
0.3138.60.88Contig3365_atContig3365--2e-85At1g09100RPT5B (26S proteasome AAA-ATPase subunit RPT5B)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.998.9GSM261072Albina f-17 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
7.098.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.498.1GSM261071Albina f-17 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
6.198.0GSM261067Xantha s-46 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.497.5GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.297.4GSM261061Xantha b-12 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.097.2GSM261066Xantha s-46 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.596.7GSM261078Albina e-16 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.296.3GSM261065Xantha s-46 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.196.2GSM261060Xantha b-12 Hardened rep2GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

A co-expression module including the rice gene, Os06g0168600, orthologous to the query gene, Contig14526_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.5068.0Os06g0168600At2g21790-Ribonucleotide reductase1e-96At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.
0.6079.7Os06g0127900At2g21790-Ribonucleoside-diphosphate reductase small chain(EC 1.17.4.1) (Ribonucleotide reductase R2 subunit)2e-7At3g27060TSO2 (TSO meaning 'ugly' in Chinese)O.I.H.G.S.X.
0.3134.5Os02g0829100At2g21790-Nucleic acid-binding OB-fold domain containingprotein3e+0At5g01390DNAJ heat shock protein, putativeO.I.H.G.S.X.
0.2931.1Os06g0671800At2g21790-Cellular retinaldehyde binding/alpha-tocopheroltransport family protein8e-1At5g34581hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.1510.3Os07g0105700At2g21790-Carboxy-terminal kinesin 2 (XCTK2)9e-8At4g05190ATK5 (ARABIDOPSIS THALIANA KINESIN 5)O.I.H.G.S.X.
0.138.2Os04g0512400At2g21790-BRCT domain containing protein1e+0At1g77932-O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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