Co-expression analysis

Gene ID Contig14498_at
Gene name
Homology with ArabidopsisSimilar to At2g43590: chitinase, putative (HF=9e-3)
Module size 9 genes
NF 0.56
%ile 78.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6480.90.86Contig14498_atContig14498--9e-3At2g43590chitinase, putativeO.I.H.G.S.X.
0.7086.00.89Contig20846_atContig20846--3e-6At4g36860zinc ion bindingO.I.H.G.S.X.
0.5975.80.92Contig11836_atContig11836--6e-10At1g22650beta-fructofuranosidase, putative / invertase, putative / saccharase, putative / beta-fructosidase, putativeO.I.H.G.S.X.
0.5975.80.92Contig18444_atContig18444--2e+0At1g08650PPCK1 (PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE)O.I.H.G.S.X.
0.5066.90.89Contig6633_atContig6633--4e+0At4g17310unknown proteinO.I.H.G.S.X.
0.4762.20.90Contig6634_atContig6634--9e-4At3g09470-O.I.H.G.S.X.
0.4661.00.91Contig78_s_atContig78--4e-5At1g15690AVP1O.I.H.G.S.X.
0.4356.40.90Contig2490_atContig2490--1e-6At1g62660beta-fructosidase (BFRUCT3) / beta-fructofuranosidase / invertase, vacuolarO.I.H.G.S.X.
0.3849.50.91Contig18440_atContig18440--2e+0At3g56590hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7187.10.89Contig6632_s_atContig6632--2e-3At5g37200zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.5572.00.86rbaal13b22_atrbaal13b22--2e-5At4g05200protein kinase family proteinO.I.H.G.S.X.
0.5268.30.85Contig21646_atContig21646--1e+0At5g42180peroxidase 64 (PER64) (P64) (PRXR4)O.I.H.G.S.X.
0.4762.20.84HW02D01u_atHW02D01u--2e-1At5g49525unknown proteinO.I.H.G.S.X.
0.4661.00.83Contig15853_atContig15853--5e+0At1g28395unknown proteinO.I.H.G.S.X.
0.4458.90.88Contig12569_atContig12569--1e+0At4g01680MYB55 (myb domain protein 55)O.I.H.G.S.X.
0.4356.40.90HVSMEn0023O21f_s_atHVSMEn0023O21f--9e-1At3g52300ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL)O.I.H.G.S.X.
0.4255.20.84Contig9772_atContig9772--2e-1At1g55190PRA7O.I.H.G.S.X.
0.3950.50.76HV09P07u_s_atHV09P07u--6e-11At1g09640elongation factor 1B-gamma, putative / eEF-1B gamma, putativeO.I.H.G.S.X.
0.3849.50.84Contig7698_atContig7698--9e-4At3g10770nucleic acid bindingO.I.H.G.S.X.
0.3849.50.86Contig12564_atContig12564--4e-1At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.H.G.S.X.
0.3545.10.82HV04H12r_atHV04H12r--4e+0At5g16650DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.3545.10.86HVSMEn0020G09f_s_atHVSMEn0020G09f--9e-1At2g20540pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.3545.10.90Contig20893_atContig20893--4e-2At1g44542cyclase family proteinO.I.H.G.S.X.
0.3545.10.80Contig25817_atContig25817--3e-1At2g25090CIPK16 (CBL-INTERACTING PROTEIN KINASE 16)O.I.H.G.S.X.
0.3443.60.86Contig9145_atContig9145--3e-3At3g24210ankyrin repeat family proteinO.I.H.G.S.X.
0.3342.60.80HV12C16u_atHV12C16u--3e-1At3g07380unknown proteinO.I.H.G.S.X.
0.3342.60.81Contig12183_atContig12183--1e-1At1g55330AGP21O.I.H.G.S.X.
0.3240.30.90Contig6587_s_atContig6587--1e-4At3g52470harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinO.I.H.G.S.X.
0.3138.60.84HVSMEg0002G23r2_atHVSMEg0002G23r2--1e+1At5g09990PROPEP5 (Elicitor peptide 5 precursor)O.I.H.G.S.X.
0.3037.00.85HV14L22u_atHV14L22u--2e-4At2g42680MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A)O.I.H.G.S.X.
0.2935.50.89Contig24888_atContig24888--1e+0At2g26940zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.2935.50.83Contig25733_atContig25733--1e+0At1g10140-O.I.H.G.S.X.
0.2935.50.83Contig2177_atContig2177--6e-10At4g12800PSAL (photosystem I subunit L)O.I.H.G.S.X.
0.2935.50.84HU10K22u_s_atHU10K22u--1e+0At3g13170ATSPO11-1O.I.H.G.S.X.
0.2935.50.87Contig10293_atContig10293--6e-17At4g27880seven in absentia (SINA) family proteinO.I.H.G.S.X.
0.2935.50.89rbaal11f18_atrbaal11f18--6e-3At1g65790ARK1 (A. THALIANA RECEPTOR KINASE 1)O.I.H.G.S.X.
0.2935.50.90Contig1682_atContig1682--2e+0At4g24972TPD1 (TAPETUM DETERMINANT 1)O.I.H.G.S.X.
0.2935.50.93Contig16389_atContig16389--4e-9At3g20440alpha-amylase/ catalytic/ cation bindingO.I.H.G.S.X.
0.2732.10.86Contig9569_atContig9569--4e-2At3g30845unknown proteinO.I.H.G.S.X.
0.2732.10.89Contig4679_s_atContig4679--2e+0At3g27820MDAR4 (MONODEHYDROASCORBATE REDUCTASE 4)O.I.H.G.S.X.
0.2732.10.85Contig15076_atContig15076--5e+0At2g32360ubiquitin family proteinO.I.H.G.S.X.
0.2732.10.91Contig6305_atContig6305--1e+0At5g14930SAG101 (SENESCENCE-ASSOCIATED GENE 101)O.I.H.G.S.X.
0.2630.40.86HY10B09u_s_atHY10B09u--3e+0At4g00893-O.I.H.G.S.X.
0.2630.40.91Contig13286_atContig13286--2e+1At5g10620-O.I.H.G.S.X.
0.2630.40.85Contig137_x_atContig137--1e-6At1g08880H2AXAO.I.H.G.S.X.
0.2630.40.80Contig9682_atContig9682--3e-12At1g76540CDKB2O.I.H.G.S.X.
0.2528.90.76HV04A09u_atHV04A09u--4e+0At5g59030COPT1 (copper transporter 1)O.I.H.G.S.X.
0.2528.90.88Contig11737_atContig11737--9e+0At5g46930invertase/pectin methylesterase inhibitor family proteinO.I.H.G.S.X.
0.2528.90.89Contig21303_atContig21303--2e+0At2g14890AGP9 (ARABINOGALACTAN PROTEIN 9)O.I.H.G.S.X.
0.2528.90.91HY09F04u_atHY09F04u--7e-1At2g21790RNR1 (RIBONUCLEOTIDE REDUCTASE 1)O.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.597.6GSM372942genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.496.6GSM372941genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
4.096.0GSM372973genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep3GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.895.7GSM372972genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372953genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.695.3GSM372959genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.595.1GSM372969genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.494.8GSM372968genotype: Mla6 - pathogen isolates: K1 - time: 24 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM372960genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep2GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO
3.294.3GSM372971genotype: Mla6 - pathogen isolates: K1 - time: 32 - rep1GSE14930Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance geneLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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