Co-expression analysis

Gene ID	Contig14457_s_at
Gene name
Homology with Arabidopsis	Similar to At2g44525: unknown protein (HF=6e-3)
Module size	6 genes
NF	0.52
%ile	72.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.53	69.7	0.93	Contig14457_s_at	Contig14457	-	-	6e-3	At2g44525	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.94	Contig733_at	Contig733	-	-	8e-19	At3g04840	40S ribosomal protein S3A (RPS3aA)	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.94	HA10M05u_s_at	HA10M05u	-	-	2e-1	At4g04680	-	O.I.	H.G.	S.X.	Please select
0.53	69.7	0.93	Contig9923_at	Contig9923	-	-	4e+0	At5g49050	-	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.94	HK04P18r_s_at	HK04P18r	CesA6 protein	-	2e+1	Atcg00130	-	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.95	Contig327_s_at	Contig327	-	-	2e-2	At2g23310	ATRER1C1	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.5	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.3	97.4	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
4.2	96.3	GSM261046	after 3 days in mannitol medium rep2	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.0	93.8	GSM261040	Dicktoo-deacclimation-rep2	GSE10329	Low temperature stress in cv. Dicktoo
2.9	93.4	GSM261032	Dicktoo control-rep3	GSE10329	Low temperature stress in cv. Dicktoo
2.8	93.1	GSM238414	Endosperm 8DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
2.7	92.7	GSM160744	drought control rep2	GSE6990	Barley drought stress
2.7	92.7	GSM261030	Dicktoo-control-rep1	GSE10329	Low temperature stress in cv. Dicktoo
2.6	92.3	GSM160815	drought control rep3	GSE6990	Barley drought stress
2.4	91.4	GSM261022	ABA-Control-rep2	GSE10328	ABA experiment

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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