Co-expression analysis

Gene ID Contig14429_at
Gene name
Homology with ArabidopsisSimilar to At3g47690: ATEB1A (HF=2e-12)
Module size 6 genes
NF 0.68
%ile 89.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7790.80.86Contig14429_atContig14429--2e-12At3g47690ATEB1AO.I.H.G.S.X.
0.7790.80.86HO14C15S_atHO14C15S--1e+0At5g64342CPuORF39 (Conserved peptide upstream open reading frame 39)O.I.H.G.S.X.
0.7187.10.86HO04L23S_atHO04L23S--1e+0At4g0081060S acidic ribosomal protein P1 (RPP1B)O.I.H.G.S.X.
0.6178.70.86HVSMEa0004N12r2_atHVSMEa0004N12r2--2e+0At3g56180unknown proteinO.I.H.G.S.X.
0.4762.20.86HVSMEa0006C16r2_s_atHVSMEa0006C16r2--2e+0At2g12475-O.I.H.G.S.X.
0.4661.00.87Contig21949_s_atContig21949--1e+0At5g37660PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
7.098.4GSM419976Palea_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
7.098.4GSM440964Control palea_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
6.598.2GSM419973Lemma_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
6.598.2GSM440958Control lemma_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.897.8GSM261077Albina e-16 Hardened rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
5.697.7GSM419979Awn_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.697.7GSM440970Control awn_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.497.5GSM419972Lemma_Rep1GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
5.497.5GSM440957Control lemma_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
5.497.5GSM261074Albina e-16 Control rep1GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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