Co-expression analysis

Gene ID	Contig14363_at
Gene name
Homology with Arabidopsis	Similar to At5g36290: unknown protein (HF=4e-8)
Module size	6 genes
NF	0.01
%ile	0.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	98.1	0.81	Contig14363_at	Contig14363	-	-	4e-8	At5g36290	unknown protein	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.87	Contig12168_at	Contig12168	-	-	4e-1	At4g16980	arabinogalactan-protein family	O.I.	H.G.	S.X.	Please select
0.02	1.8	0.85	Contig15356_at	Contig15356	-	-	5e-1	At1g24440	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select
0.01	1.1	0.86	HM14B07r_at	HM14B07r	-	-	5e+0	At4g35950	ARAC6 (ARABIDOPSIS RAC-LIKE 6)	O.I.	H.G.	S.X.	Please select
-	0.2	0.88	Contig4807_at	Contig4807	-	-	8e-11	At5g04750	F1F0-ATPase inhibitor protein, putative	O.I.	H.G.	S.X.	Please select
-	0.2	0.86	EBem10_SQ001_L08_at	EBem10_SQ001_L08	-	-	1e-1	At2g16860	GCIP-interacting family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.8	97.8	GSM261045	after 3 days in mannitol medium rep1	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
5.3	97.4	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
4.9	97.1	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.8	97.0	GSM215727	Control (DMSO) treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.7	96.9	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
4.2	96.3	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
4.2	96.3	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
4.0	96.0	GSM261047	after 3 days in mannitol medium rep3	GSE10330	Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesis
3.9	95.8	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.7	95.5	GSM440968	Stressed palea_Rep3	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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