Co-expression analysis

Gene ID Contig14154_at
Gene name
Homology with ArabidopsisSimilar to At1g60320: Toll-Interleukin-Resistance (TIR) domain-containing protein (HF=2e+0)
Module size 11 genes
NF 0.57
%ile 78.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5874.90.95Contig14154_atContig14154--2e+0At1g60320Toll-Interleukin-Resistance (TIR) domain-containing proteinO.I.H.G.S.X.
0.7891.20.96Contig24555_atContig24555--1e+0At2g45070SEC61 BETAO.I.H.G.S.X.
0.6581.40.95Contig17958_atContig17958--2e+0At5g40370glutaredoxin, putativeO.I.H.G.S.X.
0.6480.90.96rbags1e22_s_atrbags1e22--3e-1At3g56360unknown proteinO.I.H.G.S.X.
0.6178.70.96Contig12594_atContig12594--3e+0At5g11990proline-rich family proteinO.I.H.G.S.X.
0.5975.80.97Contig13332_atContig13332--2e+0At1g68280thioesterase-relatedO.I.H.G.S.X.
0.5268.30.97Contig9785_atContig9785--9e-4At4g25620hydroxyproline-rich glycoprotein family proteinO.I.H.G.S.X.
0.5066.90.97Contig9632_atContig9632--1e-1At1g78370ATGSTU20 (GLUTATHIONE S-TRANSFERASE TAU 20)O.I.H.G.S.X.
0.4458.90.96Contig8882_atContig8882--4e-2At3g59680unknown proteinO.I.H.G.S.X.
0.4053.10.97Contig5234_atContig5234--5e-11At1g09140SF2/ASF-like splicing modulator (SRP30)O.I.H.G.S.X.
0.3647.10.96Contig4737_s_atContig4737--3e-29At2g35040AICARFT/IMPCHase bienzyme family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
3.093.8GSM419983Seed_Rep3GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
3.093.8GSM440977Control seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.993.4GSM440979Stressed seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.993.4GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
2.893.1GSM440978Stressed seed_Rep1GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.591.9GSM261045after 3 days in mannitol medium rep1GSE10330Transcriptome analysis of barley anthers: effect of mannitol treatment on microspore embryogenesisLink to GEO
2.591.9GSM282033Malting_day4_Harrington_rep4GSE11200Expression data from malting barley seedsLink to GEO
2.491.4GSM440980Stressed seed_Rep3GSE17669Gene expression in the barley spike during drought stressLink to GEO
2.491.4GSM419982Seed_Rep2GSE16754Comparative transcriptional profiling of organs of the barley spikeLink to GEO
2.491.4GSM440976Control seed_Rep2GSE17669Gene expression in the barley spike during drought stressLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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