Co-expression analysis

Gene ID	Contig13984_at
Gene name
Homology with Arabidopsis	Similar to At5g07030: aspartic-type endopeptidase (HF=6e-7)
Module size	6 genes
NF	0.50
%ile	70.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.91	Contig13984_at	Contig13984	-	-	6e-7	At5g07030	aspartic-type endopeptidase	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.91	Contig4051_at	Contig4051	-	-	2e+0	At5g58575	-	O.I.	H.G.	S.X.	Please select
0.55	72.0	0.90	Contig676_at	Contig676	-	-	2e-20	At5g10980	histone H3	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.91	Contig3521_at	Contig3521	-	-	1e-3	At4g30010	unknown protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.94	Contig4056_at	Contig4056	-	-	7e-2	At1g64185	lactoylglutathione lyase family protein / glyoxalase I family protein	O.I.	H.G.	S.X.	Please select
0.29	35.5	0.91	HU11F22u_s_at	HU11F22u	-	-	4e+0	At5g12320	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.4	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
4.6	96.8	GSM372955	genotype: Mla6 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
4.6	96.8	GSM398258	Martin_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.1	96.2	GSM398272	HS41-1_5d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.7	95.5	GSM398254	Martin_1d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.5	95.1	GSM398253	Martin_1d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.4	94.8	GSM398271	HS41-1_5d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.4	94.8	GSM398252	Martin_1d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.4	94.8	GSM398270	HS41-1_5d_rep1	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.3	94.6	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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