Co-expression analysis

Gene ID	Contig13823_at
Gene name
Homology with Arabidopsis	Similar to At5g13170: SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29) (HF=2e-4)
Module size	6 genes
NF	0.47
%ile	66.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	66.9	0.83	Contig13823_at	Contig13823	-	-	2e-4	At5g13170	SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.84	Contig7083_at	Contig7083	-	-	4e-19	At5g37830	OXP1 (OXOPROLINASE 1)	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.86	Contig2043_s_at	Contig2043	-	-	1e+0	At2g35270	DNA-binding protein-related	O.I.	H.G.	S.X.	Please select
0.40	53.1	0.85	Contig21949_s_at	Contig21949	-	-	1e+0	At5g37660	PDLP7 (PLASMODESMATA-LOCATED PROTEIN 7)	O.I.	H.G.	S.X.	Please select
0.38	49.5	0.84	Contig25981_at	Contig25981	-	-	9e-8	At1g64350	SEH1H	O.I.	H.G.	S.X.	Please select
0.31	38.6	0.84	Contig6997_at	Contig6997	-	-	2e-1	At4g39140	protein binding / zinc ion binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.8	97.0	GSM261074	Albina e-16 Control rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.2	96.3	GSM261072	Albina f-17 Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.2	96.3	GSM261075	Albina e-16 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.0	96.0	GSM311263	kara_without_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
3.7	95.5	GSM261071	Albina f-17 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.7	95.5	GSM261077	Albina e-16 Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.5	95.1	GSM372981	genotype: 11542 - pathogen isolates: 5874 - time: 16 - rep2	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.3	94.6	GSM261069	Albina f-17 Control rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
3.2	94.3	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.0	93.8	GSM215729	gibberellin plus Yariv-reagent treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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