Co-expression analysis

Gene ID	Contig13815_at
Gene name
Homology with Arabidopsis	Similar to At5g50130: short-chain dehydrogenase/reductase (SDR) family protein (HF=2e+0)
Module size	6 genes
NF	0.22
%ile	27.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	0.95	Contig13815_at	Contig13815	-	-	2e+0	At5g50130	short-chain dehydrogenase/reductase (SDR) family protein	O.I.	H.G.	S.X.	Please select
0.46	61.0	0.95	Contig14434_at	Contig14434	-	-	1e-1	At2g41260	M17	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.96	Contig5985_at	Contig5985	-	-	1e-3	At3g50590	nucleotide binding	O.I.	H.G.	S.X.	Please select
0.36	47.1	0.95	Contig1300_x_at	Contig1300	-	-	2e-168	At2g36530	LOS2	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.95	Contig23513_at	Contig23513	-	-	7e+0	At5g49260	unknown protein	O.I.	H.G.	S.X.	Please select
0.07	5.8	0.95	Contig11661_at	Contig11661	-	-	2e-28	At4g21110	G10 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
55.4	100.0	GSM238415	Endosperm 8DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
11.3	99.3	GSM382237	Root_Control3	GSE15295	Mercury toxicity in barley roots
9.9	99.1	GSM382236	Root_Control2	GSE15295	Mercury toxicity in barley roots
9.3	99.0	GSM382235	Root_Control1	GSE15295	Mercury toxicity in barley roots
7.0	98.4	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
6.4	98.1	GSM382234	Root_Hg3	GSE15295	Mercury toxicity in barley roots
6.4	98.1	GSM146360	Golden Promise Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.5	97.6	GSM372961	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
5.5	97.6	GSM146366	Maythorpe Root Salt, biological rep 1	GSE6325	Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
5.4	97.5	GSM440978	Stressed seed_Rep1	GSE17669	Gene expression in the barley spike during drought stress

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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