Co-expression analysis

Gene ID Contig13791_at
Gene name
Homology with ArabidopsisSimilar to At1g26850: dehydration-responsive family protein (HF=3e-11)
Module size 6 genes
NF 0.09
%ile 11.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7187.10.93Contig13791_atContig13791--3e-11At1g26850dehydration-responsive family proteinO.I.H.G.S.X.
0.2935.50.93Contig2539_x_atContig2539--5e+0At4g24300peptidaseO.I.H.G.S.X.
0.2528.90.96Contig10218_atContig10218--2e+0At2g44820unknown proteinO.I.H.G.S.X.
0.086.50.95Contig20481_atContig20481--4e+0At5g42825unknown proteinO.I.H.G.S.X.
0.064.80.95Contig8973_atContig8973--5e-10At3g47930ATGLDH (L-GALACTONO-1,4-LACTONE DEHYDOROGENASE)O.I.H.G.S.X.
0.032.60.93Contig7117_atContig7117--8e-4At3g17880ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.897.8GSM238430Embryo 25DAF; Seed development; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
5.597.6GSM238431Embryo 25DAF; Seed development; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.997.1GSM282025Control_dryseed_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.897.0GSM282032Malting_day1_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
4.796.9GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
4.796.9GSM282041Control_dryseed_Morex_rep2GSE11200Expression data from malting barley seedsLink to GEO
4.696.8GSM238433Embryo 0 h; Seed germination; Rep 2GSE9365Expression data from barley maturing and germinating grainsLink to GEO
4.096.0GSM282038Malting_kilned_Morex_rep1GSE11200Expression data from malting barley seedsLink to GEO
3.895.7GSM238432Embryo 0 h; Seed germination; Rep 1GSE9365Expression data from barley maturing and germinating grainsLink to GEO
3.294.3GSM282020Malting_day4_Legacy_rep 3GSE11200Expression data from malting barley seedsLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



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