Co-expression analysis

Gene ID	Contig13711_at
Gene name
Homology with Arabidopsis	Similar to At3g22942: AGG2 (G-PROTEIN GAMMA SUBUNIT 2) (HF=2e+0)
Module size	6 genes
NF	0.54
%ile	74.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	78.7	0.96	Contig13711_at	Contig13711	-	-	2e+0	At3g22942	AGG2 (G-PROTEIN GAMMA SUBUNIT 2)	O.I.	H.G.	S.X.	Please select
0.91	98.1	0.96	Contig6058_at	Contig6058	-	-	8e-1	At2g22250	aminotransferase class I and II family protein	O.I.	H.G.	S.X.	Please select
0.61	78.7	0.96	HVSMEc0015C10r2_at	HVSMEc0015C10r2	-	-	1e-9	At5g06950	AHBP-1B	O.I.	H.G.	S.X.	Please select
0.56	74.3	0.96	Contig6454_at	Contig6454	-	-	6e-1	At3g50520	phosphoglycerate/bisphosphoglycerate mutase family protein	O.I.	H.G.	S.X.	Please select
0.35	45.1	0.96	Contig12004_at	Contig12004	-	-	2e-1	At3g63410	APG1 (ALBINO OR PALE GREEN MUTANT 1)	O.I.	H.G.	S.X.	Please select
0.32	40.3	0.96	Contig12184_at	Contig12184	-	-	5e-1	At1g58350	ZW18	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
62.9	100.0	GSM238412	Endosperm 4DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
4.7	96.9	GSM363461	Control (C) - rep2	GSE14521	Late response to boron toxicity in barley leaves
4.2	96.3	GSM238413	Endosperm 4DAF; Seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
3.9	95.8	GSM282036	Malting_steeped_Morex_rep2	GSE11200	Expression data from malting barley seeds
3.8	95.7	GSM215730	Control (DMSO) treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.8	95.7	GSM398263	HS41-1_0d_rep3	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
3.5	95.1	GSM215732	gibberellin plus Yariv-reagent treatment rep2	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling
3.2	94.3	GSM372959	genotype: Mla6 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.2	94.3	GSM372941	genotype: Mla6 - pathogen isolates: 5874 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
3.1	94.1	GSM215728	gibberellin treatment rep1	GSE8712	The effects of Yariv-reagent on barley aleurone GA signaling

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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