Co-expression analysis

Gene ID	Contig13615_at
Gene name
Homology with Arabidopsis	Similar to At4g15120: VQ motif-containing protein (HF=1e-5)
Module size	6 genes
NF	0.10
%ile	12.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	84.7	0.92	Contig13615_at	Contig13615	-	-	1e-5	At4g15120	VQ motif-containing protein	O.I.	H.G.	S.X.	Please select
0.60	77.3	0.92	Contig24742_at	Contig24742	-	-	2e+0	At1g78210	hydrolase, alpha/beta fold family protein	O.I.	H.G.	S.X.	Please select
0.27	32.1	0.91	HVSMEl0002M03r2_x_at	HVSMEl0002M03r2	-	-	4e+1	At5g55630	ATKCO1	O.I.	H.G.	S.X.	Please select
0.22	24.2	0.91	HVSMEm0019L12r2_at	HVSMEm0019L12r2	-	-	5e-9	At1g79120	ubiquitin thiolesterase	O.I.	H.G.	S.X.	Please select
0.21	22.6	0.92	Contig22438_at	Contig22438	-	-	4e+0	At3g27416	unknown protein	O.I.	H.G.	S.X.	Please select
0.03	2.6	0.91	Contig20226_at	Contig20226	-	-	4e-14	At3g59570	RabGAP/TBC domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
15.8	99.6	GSM311205	28-4_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
11.2	99.2	GSM311254	hsp5_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
11.1	99.2	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
10.2	99.1	GSM311261	kara_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
9.5	99.0	GSM238411	Pericarp 8DAF; seed development; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
8.0	98.7	GSM311260	kara_with_aphids_2	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
7.6	98.6	GSM372995	genotype: 11542 - pathogen isolates: K1 - time: 8 - rep1	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.6	98.6	GSM372991	genotype: 11542 - pathogen isolates: 5874 - time: 32 - rep3	GSE14930	Comparison of wild-type and cell death mutant of barley plants containing Mla6 powdery mildew resistance gene
7.4	98.5	GSM311255	hsp5_with_aphids_3	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines
6.5	98.2	GSM311204	28-4_with_aphids_1	GSE12584	Microarray analysis of the interaction between Rhopalosiphum padi and partially resistant or susceptible barley lines

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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