Co-expression analysis

Gene ID	Contig13577_at
Gene name
Homology with Arabidopsis	Similar to At5g65650: unknown protein (HF=2e+0)
Module size	6 genes
NF	0.37
%ile	50.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	88.7	0.93	Contig13577_at	Contig13577	-	-	2e+0	At5g65650	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.93	Contig4056_at	Contig4056	-	-	7e-2	At1g64185	lactoylglutathione lyase family protein / glyoxalase I family protein	O.I.	H.G.	S.X.	Please select
0.44	58.9	0.92	Contig4423_at	Contig4423	-	-	4e+0	At5g58400	peroxidase, putative	O.I.	H.G.	S.X.	Please select
0.33	42.6	0.92	HU11F22u_s_at	HU11F22u	-	-	4e+0	At5g12320	ankyrin repeat family protein	O.I.	H.G.	S.X.	Please select
0.20	21.1	0.93	Contig7548_at	Contig7548	-	-	5e-35	At2g19830	SNF7.2	O.I.	H.G.	S.X.	Please select
0.19	19.6	0.91	HVSMEh0085P21r2_x_at	HVSMEh0085P21r2	-	-	1e+1	At4g35263	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.3	97.4	GSM261073	Albina f-17 Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
4.7	96.9	GSM382232	Root_Hg1	GSE15295	Mercury toxicity in barley roots
3.9	95.8	GSM213443	Barley seeds with P. aeruginosa PA5021 mutant for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.8	95.7	GSM161148	7% SWC rep3	GSE6990	Barley drought stress
3.3	94.6	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.2	94.3	GSM160823	19% SWC rep1	GSE6990	Barley drought stress
3.2	94.3	GSM213436	Barley seeds with P. aeruginosa PAO1 for 12hr	GSE8618	P. aeruginosa virulent factor to barley
3.1	94.1	GSM160826	19% SWC rep3	GSE6990	Barley drought stress
3.1	94.1	GSM160819	38% SWC rep1	GSE6990	Barley drought stress
2.9	93.4	GSM261038	Dicktoo-subzero-rep3	GSE10329	Low temperature stress in cv. Dicktoo

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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