Co-expression analysis

Gene ID Contig13577_at
Gene name
Homology with ArabidopsisSimilar to At5g65650: unknown protein (HF=2e+0)
Module size 6 genes
NF 0.37
%ile 50.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7388.70.93Contig13577_atContig13577--2e+0At5g65650unknown proteinO.I.H.G.S.X.
0.6784.70.93Contig4056_atContig4056--7e-2At1g64185lactoylglutathione lyase family protein / glyoxalase I family proteinO.I.H.G.S.X.
0.4458.90.92Contig4423_atContig4423--4e+0At5g58400peroxidase, putativeO.I.H.G.S.X.
0.3342.60.92HU11F22u_s_atHU11F22u--4e+0At5g12320ankyrin repeat family proteinO.I.H.G.S.X.
0.2021.10.93Contig7548_atContig7548--5e-35At2g19830SNF7.2O.I.H.G.S.X.
0.1919.60.91HVSMEh0085P21r2_x_atHVSMEh0085P21r2--1e+1At4g35263unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.397.4GSM261073Albina f-17 Hardened rep3GSE10332Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1Link to GEO
4.796.9GSM382232Root_Hg1GSE15295Mercury toxicity in barley rootsLink to GEO
3.995.8GSM213443Barley seeds with P. aeruginosa PA5021 mutant for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.895.7GSM1611487% SWC rep3GSE6990Barley drought stressLink to GEO
3.394.6GSM213441Barley seeds control in Hoagland solution for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.294.3GSM16082319% SWC rep1GSE6990Barley drought stressLink to GEO
3.294.3GSM213436Barley seeds with P. aeruginosa PAO1 for 12hrGSE8618P. aeruginosa virulent factor to barleyLink to GEO
3.194.1GSM16082619% SWC rep3GSE6990Barley drought stressLink to GEO
3.194.1GSM16081938% SWC rep1GSE6990Barley drought stressLink to GEO
2.993.4GSM261038Dicktoo-subzero-rep3GSE10329Low temperature stress in cv. DicktooLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera
Zea_mays



Back to the CoP portal site

Back to the KAGIANA project homepage