Co-expression analysis

Gene ID	Contig13456_at
Gene name
Homology with Arabidopsis	Similar to At1g48790: mov34 family protein (HF=2e-9)
Module size	6 genes
NF	0.35
%ile	48.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.80	92.5	0.90	Contig13456_at	Contig13456	-	-	2e-9	At1g48790	mov34 family protein	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.85	bah21p16_at	bah21p16	-	-	2e-125	Atmg00160	-	O.I.	H.G.	S.X.	Please select
0.73	88.7	0.89	S0000800200E11F1_at	S0000800200E11F1	-	-	4e-25	Atmg00070	-	O.I.	H.G.	S.X.	Please select
0.67	84.7	0.90	MitoContig2_at	MitoContig2	-	-	3e-57	Atmg00285	-	O.I.	H.G.	S.X.	Please select
0.50	66.9	0.88	Contig18447_at	Contig18447	-	-	2e-1	At4g29670	thioredoxin family protein	O.I.	H.G.	S.X.	Please select
0.06	4.8	0.89	Contig24196_at	Contig24196	-	-	3e+0	At3g50925	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.5	99.0	GSM261053	Bonus Hardened rep1	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
7.7	98.6	GSM261054	Bonus Hardened rep2	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
6.1	98.0	GSM213441	Barley seeds control in Hoagland solution for 12hr	GSE8618	P. aeruginosa virulent factor to barley
5.8	97.8	GSM261055	Bonus Hardened rep3	GSE10332	Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants1
5.6	97.7	GSM213443	Barley seeds with P. aeruginosa PA5021 mutant for 12hr	GSE8618	P. aeruginosa virulent factor to barley
5.4	97.5	GSM238428	Embryo 16DAF; Seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains
5.3	97.4	GSM398250	Martin_0d_rep2	GSE15970	Differentially Expressed Genes between Drought-tolerant and Drought-sensitive Barley Genotypes
4.9	97.1	GSM238435	Embryo 24 h; Seed germination; Rep 2	GSE9365	Expression data from barley maturing and germinating grains
4.8	97.0	GSM213436	Barley seeds with P. aeruginosa PAO1 for 12hr	GSE8618	P. aeruginosa virulent factor to barley
4.7	96.9	GSM238410	Pericarp 8DAF; seed development; Rep 1	GSE9365	Expression data from barley maturing and germinating grains

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

Zea_mays

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